Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC093010.3-201ENST00000570269 15214 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 AC073325.2-201ENST00000339545 159 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 Y_RNA.71-201ENST00000362892 104 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 RNU6-727P-201ENST00000363592 107 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 Y_RNA.218-201ENST00000364218 104 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 SNORA71.1-201ENST00000364523 117 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 RNU4-11P-201ENST00000365287 132 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 SNORD116-14-201ENST00000383894 92 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 SNORD116-17-201ENST00000383929 92 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 SNORD116-15-201ENST00000384445 92 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 SNORD15B-201ENST00000384714 146 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 SNORD116-19-201ENST00000384729 92 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 MIR549A-201ENST00000385268 96 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 RNU6-381P-201ENST00000391259 108 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CD248Q9HCU0 AC019205.3-201ENST00000424573 156 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 MTND4LP9-201ENST00000427694 174 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.11□□□□□ -1.91
CD248Q9HCU0 AC103975.1-201ENST00000482506 483 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 RPL23AP70-201ENST00000483361 460 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 RN7SKP164-201ENST00000516138 266 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 DEFB131C-201ENST00000528817 165 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.11□□□□□ -1.91
CD248Q9HCU0 AP002001.1-203ENST00000534002 267 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.11□□□□□ -1.91
CD248Q9HCU0 AC009163.5-201ENST00000575421 637 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 AL449363.1-201ENST00000617815 186 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 MIR3529-201ENST00000637713 78 ntBASIC3.11□□□□□ -1.91
CD248Q9HCU0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD248Q9HCU0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CD248Q9HCU0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CD248Q9HCU0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CD248Q9HCU0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CD248Q9HCU0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CD248Q9HCU0 RNU6-103P-201ENST00000363686 107 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 RNU6-324P-201ENST00000363957 106 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 SNORD67-201ENST00000390833 111 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 MIR888-201ENST00000401186 77 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 MIR320B2-201ENST00000408479 138 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 SNORD88.1-201ENST00000408684 91 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 HMGN2P35-201ENST00000412164 270 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.1□□□□□ -1.91
CD248Q9HCU0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.1□□□□□ -1.91
CD248Q9HCU0 AC074290.1-201ENST00000448883 135 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 RPL26P9-201ENST00000457466 433 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 U8.19-201ENST00000459095 133 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 AC107027.2-201ENST00000512197 115 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 SNORA31.16-201ENST00000516773 139 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 AC109329.2-201ENST00000519658 482 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 MIR4744-201ENST00000581563 82 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 DNAJC19P2-201ENST00000593340 302 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 AL356575.1-201ENST00000603008 283 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 AC006023.1-201ENST00000603944 259 ntBASIC3.1□□□□□ -1.91
CD248Q9HCU0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.1□□□□□ -1.91
CD248Q9HCU0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CD248Q9HCU0 RNU1-62P-201ENST00000362599 164 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 MIR539-201ENST00000365690 78 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.09□□□□□ -1.91
CD248Q9HCU0 SNORA20-201ENST00000384662 132 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 RNU6-376P-201ENST00000384731 106 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 RNU6-578P-201ENST00000390980 103 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 RNA5SP390-201ENST00000410191 113 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 AC096649.2-201ENST00000416186 393 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 AL135938.1-201ENST00000443141 297 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 RNU6-1211P-201ENST00000459179 105 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.09□□□□□ -1.91
CD248Q9HCU0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.09□□□□□ -1.91
CD248Q9HCU0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.09□□□□□ -1.91
CD248Q9HCU0 RNU6-436P-201ENST00000516171 114 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 RNU6-581P-201ENST00000516214 105 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 AC021269.2-201ENST00000532318 330 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 AC022616.8-201ENST00000533569 253 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.09□□□□□ -1.91
CD248Q9HCU0 RPL12P50-201ENST00000603116 116 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 AC069294.1-201ENST00000608397 350 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 AL078604.3-201ENST00000615580 211 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 ADAM3A-203ENST00000461344 2157 ntBASIC3.09□□□□□ -1.91
CD248Q9HCU0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.09□□□□□ -1.92
CD248Q9HCU0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.08□□□□□ -1.92
CD248Q9HCU0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.08□□□□□ -1.92
CD248Q9HCU0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.08□□□□□ -1.92
CD248Q9HCU0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.08□□□□□ -1.92
CD248Q9HCU0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CD248Q9HCU0 MIR22-201ENST00000362190 85 ntBASIC3.08□□□□□ -1.92
CD248Q9HCU0 RNU6-899P-201ENST00000363947 107 ntBASIC3.08□□□□□ -1.92
CD248Q9HCU0 RNU6-153P-201ENST00000364422 104 ntBASIC3.08□□□□□ -1.92
CD248Q9HCU0 RNU6-1325P-201ENST00000364905 105 ntBASIC3.08□□□□□ -1.92
CD248Q9HCU0 SNORA18.3-201ENST00000384122 132 ntBASIC3.08□□□□□ -1.92
CD248Q9HCU0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.08□□□□□ -1.92
CD248Q9HCU0 U3.40-201ENST00000408706 208 ntBASIC3.08□□□□□ -1.92
CD248Q9HCU0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.08□□□□□ -1.92
CD248Q9HCU0 RPS12P18-201ENST00000442381 270 ntBASIC3.08□□□□□ -1.92
CD248Q9HCU0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.08□□□□□ -1.92
CD248Q9HCU0 AC090525.1-201ENST00000479116 478 ntBASIC3.08□□□□□ -1.92
CD248Q9HCU0 RPS27AP10-201ENST00000496103 208 ntBASIC3.08□□□□□ -1.92
CD248Q9HCU0 AIG1P1-201ENST00000503376 148 ntBASIC3.08□□□□□ -1.92
CD248Q9HCU0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.08□□□□□ -1.92
CD248Q9HCU0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CD248Q9HCU0 AC090897.2-201ENST00000581715 130 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms