Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 AC090049.2-201ENST00000550377 109 ntBASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 MIR3684-201ENST00000579779 74 ntBASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 AC010525.2-201ENST00000590920 195 ntBASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 AL158827.2-201ENST00000602494 330 ntBASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 AC124303.1-201ENST00000605703 360 ntBASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 AC009248.2-201ENST00000619826 254 ntBASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 AL691447.3-201ENST00000635020 330 ntBASIC0.69□□□□□ -2.3
SND1-IT1Q9HBX3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 AP000568.1-201ENST00000282964 442 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 Y_RNA.100-201ENST00000363141 102 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 Y_RNA.179-201ENST00000363844 90 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 Y_RNA.372-201ENST00000365599 102 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 Y_RNA.490-201ENST00000384413 102 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 SNORD41-201ENST00000386967 70 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 RNU6-910P-201ENST00000390844 107 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 RPL23AP36-201ENST00000413895 458 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 MTCO3P19-201ENST00000415864 321 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 BTF3P4-201ENST00000418852 495 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 AC245047.7-201ENST00000440265 293 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 STAG3L5P-204ENST00000443759 179 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 HSPE1P13-201ENST00000451143 297 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 snoU13.26-201ENST00000459452 105 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 AC010598.1-201ENST00000510378 103 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 RNU6-256P-201ENST00000516747 97 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 RNU7-28P-201ENST00000516759 62 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 MIR5696-201ENST00000578474 85 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 MTND1P15-201ENST00000579262 949 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 NBR2-204ENST00000587322 63 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 AL353770.2-201ENST00000620024 78 ntBASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SND1-IT1Q9HBX3 RNU1-17P-201ENST00000363022 152 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 RNU6-727P-201ENST00000363592 107 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 Y_RNA.256-201ENST00000364594 104 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 RNU6-596P-201ENST00000365395 98 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 RNU6-424P-201ENST00000384367 105 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 MIR200A-201ENST00000384875 90 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 AL451046.2-201ENST00000403074 277 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 AC243428.1-201ENST00000421099 264 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 MTND1P26-201ENST00000440488 538 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 AC098826.2-201ENST00000452011 651 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 SNORD65B-201ENST00000459126 73 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 RPS27P22-201ENST00000478056 241 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 AC097462.1-201ENST00000514125 324 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 SNORD79.1-201ENST00000516069 84 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 RN7SKP49-201ENST00000516675 260 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 MTND3P12-201ENST00000559068 328 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 SNORD114-21-201ENST00000606412 72 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 Z99129.1-201ENST00000612510 255 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 MIR6079-201ENST00000635807 62 ntBASIC0.67□□□□□ -2.3
SND1-IT1Q9HBX3 RNU6-451P-201ENST00000362921 107 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 RNY3P3-201ENST00000363816 102 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 SNORD114-24-201ENST00000365029 72 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 RNU1-36P-201ENST00000365130 165 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 Y_RNA.373-201ENST00000365600 103 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 MIR10B-201ENST00000385011 110 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 RNU2-16P-201ENST00000410712 136 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 AL590632.1-201ENST00000424289 371 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 MTATP6P17-201ENST00000431030 672 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 MTCO2P7-201ENST00000446518 666 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 RPL39P39-201ENST00000455840 151 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 SNORA59A-201ENST00000459326 152 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 AC048334.1-201ENST00000477975 159 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 RPL23AP94-201ENST00000512518 302 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 MIR4778-201ENST00000577635 80 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 AL020996.3-201ENST00000606617 222 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 AC092954.2-201ENST00000609103 430 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 AC019193.3-201ENST00000609144 554 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 AC010999.1-201ENST00000611856 324 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 AL157834.3-201ENST00000615543 103 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 AC106754.2-201ENST00000623006 233 ntBASIC0.66□□□□□ -2.3
SND1-IT1Q9HBX3 Y_RNA.212-201ENST00000364177 102 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 SNORA2.2-201ENST00000365473 135 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.414-201ENST00000384011 101 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 RNU1-139P-201ENST00000391307 165 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 AF228730.1-201ENST00000397972 663 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 Y_RNA.615-201ENST00000410769 117 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 RPL30P16-201ENST00000419341 429 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 USMG5P1-201ENST00000425964 177 ntBASIC0.65□□□□□ -2.31
SND1-IT1Q9HBX3 MTATP6P13-201ENST00000438531 667 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms