Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
VIPAS39Q9H9C1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-296P-201ENST00000384608 107 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 RNA5SP213-201ENST00000391031 106 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 RNU1-139P-201ENST00000391307 165 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 EIF1P2-201ENST00000428233 350 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 AC027575.1-201ENST00000481064 460 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 AC022493.2-201ENST00000506122 481 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 AC093303.1-201ENST00000514549 295 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 RNA5SP437-201ENST00000517249 129 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 AC025647.1-201ENST00000517879 253 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 AC110588.1-201ENST00000559699 137 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 AC090617.3-201ENST00000573670 475 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 MIR4255-201ENST00000579351 72 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 MIR5690-201ENST00000583739 73 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 AC010900.2-201ENST00000604508 210 ntBASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
VIPAS39Q9H9C1 AC010615.1-201ENST00000594254 1764 ntBASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-890P-201ENST00000384121 107 ntBASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 MIR1185-2-201ENST00000408687 86 ntBASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 MIR2053-201ENST00000459295 91 ntBASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-221P-201ENST00000459541 99 ntBASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 AC008834.1-201ENST00000511612 175 ntBASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-307P-201ENST00000516743 106 ntBASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 AL357075.2-201ENST00000614906 189 ntBASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 MIR1302-1-201ENST00000637932 143 ntBASIC1.57□□□□□ -2.16
VIPAS39Q9H9C1 AL356292.1-201ENST00000283110 373 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 U3.8-201ENST00000363675 217 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 RNY3P11-201ENST00000364153 102 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-1240P-201ENST00000365155 104 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 MIR329-1-201ENST00000385028 80 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 HSPE1P9-201ENST00000440046 311 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 HMGN2P23-201ENST00000456759 269 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 AC105758.1-201ENST00000506038 399 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-277P-201ENST00000516272 106 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 RNA5SP61-201ENST00000516453 100 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-264P-201ENST00000517134 104 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 MIR548S-201ENST00000581352 82 ntBASIC1.56□□□□□ -2.16
VIPAS39Q9H9C1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 MIR520A-201ENST00000384862 85 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 Y_RNA.595-201ENST00000410403 105 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 CST2P1-201ENST00000425770 87 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 AC073910.1-201ENST00000445047 438 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 MTND4P18-201ENST00000447010 465 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 UQCRBP2-201ENST00000447827 297 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 Y_RNA.653-201ENST00000459091 95 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 RNU7-169P-201ENST00000459456 61 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-970P-201ENST00000516312 107 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-875P-201ENST00000516488 106 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 MIR3945-201ENST00000581853 98 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 AL353149.1-201ENST00000610667 244 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 AL132765.2-201ENST00000610812 351 ntBASIC1.55□□□□□ -2.16
VIPAS39Q9H9C1 Y_RNA.259-201ENST00000364619 101 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 Y_RNA.356-201ENST00000365475 113 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-1297P-201ENST00000384415 104 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 RNA5SP323-201ENST00000391094 133 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 SNORA75.6-201ENST00000391318 127 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 MIR934-201ENST00000401241 83 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 MTCYBP4-201ENST00000401524 249 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 MIR1261-201ENST00000408659 82 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-1156P-201ENST00000410365 100 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 AC114482.1-201ENST00000418010 247 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 AC008134.1-201ENST00000420943 193 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 AC005002.2-201ENST00000438228 269 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 AC005908.1-201ENST00000468701 347 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 HMGN1P13-201ENST00000505795 138 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 AL355375.2-201ENST00000574825 175 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 AC116312.1-201ENST00000606841 314 ntBASIC1.54□□□□□ -2.16
VIPAS39Q9H9C1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms