Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 Y_RNA.136-201ENST00000363444 102 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 SNORD115-8-201ENST00000363856 82 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 Y_RNA.233-201ENST00000364407 101 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 Y_RNA.240-201ENST00000364469 95 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 SNORD115-38-201ENST00000365037 82 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 RNU6-394P-201ENST00000410735 107 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 AC138623.1-201ENST00000418060 216 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.54□□□□□ -2
EBF3Q9H4W6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.54□□□□□ -2
EBF3Q9H4W6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.54□□□□□ -2
EBF3Q9H4W6 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 UQCRBP2-201ENST00000447827 297 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 NDUFB4P10-201ENST00000452541 359 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 AC234781.5-201ENST00000508429 271 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 RNU6-1219P-201ENST00000516143 112 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.54□□□□□ -2
EBF3Q9H4W6 MRPS18CP4-201ENST00000535821 231 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 MZT1P2-201ENST00000604387 248 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 AC104465.1-201ENST00000611365 139 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.54□□□□□ -2
EBF3Q9H4W6 U6.106-201ENST00000636360 105 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
EBF3Q9H4W6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.54□□□□□ -2
EBF3Q9H4W6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
EBF3Q9H4W6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
EBF3Q9H4W6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
EBF3Q9H4W6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.53□□□□□ -2
EBF3Q9H4W6 RNU6-1010P-201ENST00000362757 107 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 RNU6-873P-201ENST00000363833 107 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 Y_RNA.331-201ENST00000365267 102 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 RNA5SP425-201ENST00000410336 112 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 RNU6-1135P-201ENST00000411083 103 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 AC244670.1-201ENST00000436879 112 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 GPM6BP3-201ENST00000442797 145 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 TMSB4XP3-201ENST00000445144 114 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 IFNA11P-201ENST00000446352 526 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 AC007395.1-201ENST00000451333 677 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 RPS27P26-201ENST00000494583 239 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 RPS29P21-201ENST00000496272 170 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.53□□□□□ -2
EBF3Q9H4W6 Y_RNA.679-201ENST00000516416 91 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 AC115990.1-201ENST00000526957 301 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
EBF3Q9H4W6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.53□□□□□ -2
EBF3Q9H4W6 AC021231.3-201ENST00000558497 370 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 MIR3144-201ENST00000579460 79 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 AL365265.1-201ENST00000621045 234 ntBASIC2.53□□□□□ -2
EBF3Q9H4W6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.53□□□□□ -2
EBF3Q9H4W6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.53□□□□□ -2
EBF3Q9H4W6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.52□□□□□ -2.01
EBF3Q9H4W6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.8-201ENST00000362353 102 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.101-201ENST00000363154 102 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.217-201ENST00000364214 105 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 RNY1P5-201ENST00000383890 115 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.398-201ENST00000383952 99 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 MIR767-201ENST00000390228 109 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 RNA5SP354-201ENST00000391247 136 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AL358075.3-201ENST00000426289 226 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.52□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.641-201ENST00000459414 105 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 snoU13.26-201ENST00000459452 105 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AP001324.2-201ENST00000461163 319 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AC091021.1-201ENST00000468051 388 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.662-201ENST00000516028 97 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 SNORA31.16-201ENST00000516773 139 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AC026241.1-201ENST00000517873 2142 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AC021269.2-201ENST00000532318 330 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AP002001.1-203ENST00000534002 267 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 MIR3145-201ENST00000580727 82 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 RPS15AP11-201ENST00000594193 385 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AL049779.4-201ENST00000604500 156 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AC022441.3-201ENST00000605737 136 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AC005828.6-201ENST00000606610 232 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AC046143.2-201ENST00000609789 160 ntBASIC2.52□□□□□ -2.01
EBF3Q9H4W6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.52□□□□□ -2.01
EBF3Q9H4W6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
EBF3Q9H4W6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
EBF3Q9H4W6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
EBF3Q9H4W6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
EBF3Q9H4W6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
EBF3Q9H4W6 RNU6-137P-201ENST00000363680 108 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 RNU6-704P-201ENST00000364162 103 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.230-201ENST00000364348 109 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 Y_RNA.308-201ENST00000365043 101 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 MIR147B-201ENST00000390185 80 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 RNU5E-9P-201ENST00000411164 104 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 RNU6-1199P-201ENST00000411249 104 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 RN7SKP192-201ENST00000411291 327 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 MTATP6P29-201ENST00000415057 132 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 POLR2KP2-201ENST00000438155 177 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 snoU13.14-201ENST00000459372 104 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 RPL30P12-201ENST00000474666 353 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.51□□□□□ -2.01
EBF3Q9H4W6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms