Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 Y_RNA.709-201ENST00000516952 92 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 RNU2-12P-201ENST00000517216 168 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 AC009127.3-201ENST00000570531 403 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 AL078604.3-201ENST00000615580 211 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 TUG1_4.1-201ENST00000619464 181 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS11Q9H270 ZNF702P-202ENST00000434269 1966 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
VPS11Q9H270 RNU6-454P-201ENST00000364292 107 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 RNU6-476P-201ENST00000384726 107 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 MIR7-3-201ENST00000384898 110 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 MIR626-201ENST00000385032 94 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 SNORD67-201ENST00000390833 111 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 FO393413.1-201ENST00000402892 195 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 RNA5SP492-201ENST00000411330 114 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 EIF4EP4-201ENST00000424916 578 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS11Q9H270 AC092427.1-202ENST00000430569 476 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 AC023141.11-201ENST00000508864 202 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS11Q9H270 RNU6-1198P-201ENST00000516904 67 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 AC027176.1-201ENST00000560204 514 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 AC024614.2-201ENST00000577584 372 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 MIR4679-2-201ENST00000578358 77 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 LARP7P3-201ENST00000579888 337 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 AC105245.1-201ENST00000581934 244 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 MIR3117-201ENST00000584034 78 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 AL356280.1-201ENST00000603614 379 ntBASIC3.05□□□□□ -1.92
VPS11Q9H270 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS11Q9H270 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
VPS11Q9H270 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS11Q9H270 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
VPS11Q9H270 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
VPS11Q9H270 AC134026.1-201ENST00000623249 2239 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VPS11Q9H270 RNU6-103P-201ENST00000363686 107 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 Y_RNA.179-201ENST00000363844 90 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 RNU6-1141P-201ENST00000364520 107 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 RNU6-1144P-201ENST00000384247 104 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 Y_RNA.498-201ENST00000384460 102 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 SNORD15B-201ENST00000384714 146 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 MIR218-1-201ENST00000384999 110 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 MIR181B1-201ENST00000385240 110 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 RN7SKP61-201ENST00000410642 295 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 RPS26P42-201ENST00000413485 326 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS11Q9H270 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS11Q9H270 RPS29P6-201ENST00000438196 145 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS11Q9H270 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS11Q9H270 RN7SL863P-201ENST00000462370 296 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 RN7SL293P-201ENST00000481765 281 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS11Q9H270 RNU6-589P-201ENST00000516485 107 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS11Q9H270 AC115990.1-201ENST00000526957 301 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 AC023043.3-201ENST00000593113 385 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 AC011603.4-201ENST00000611325 277 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 AC013791.1-201ENST00000616619 62 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 AC012640.5-201ENST00000623897 319 ntBASIC3.04□□□□□ -1.92
VPS11Q9H270 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS11Q9H270 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS11Q9H270 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS11Q9H270 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS11Q9H270 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS11Q9H270 RNU6-199P-201ENST00000362954 107 ntBASIC3.03□□□□□ -1.92
VPS11Q9H270 RNU6-529P-201ENST00000363383 104 ntBASIC3.03□□□□□ -1.92
VPS11Q9H270 SNORD56.5-201ENST00000364281 72 ntBASIC3.03□□□□□ -1.92
VPS11Q9H270 RNU6-147P-201ENST00000383983 107 ntBASIC3.03□□□□□ -1.92
VPS11Q9H270 SNORD88.1-201ENST00000408684 91 ntBASIC3.03□□□□□ -1.92
VPS11Q9H270 AL445687.1-201ENST00000439946 251 ntBASIC3.03□□□□□ -1.92
VPS11Q9H270 RNA5SP54-201ENST00000516951 92 ntBASIC3.03□□□□□ -1.92
VPS11Q9H270 UBL5P2-201ENST00000583788 219 ntBASIC3.03□□□□□ -1.92
VPS11Q9H270 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.03□□□□□ -1.92
VPS11Q9H270 AC012314.7-201ENST00000619693 93 ntBASIC3.03□□□□□ -1.92
VPS11Q9H270 MIR3674-201ENST00000636576 68 ntBASIC3.03□□□□□ -1.92
VPS11Q9H270 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS11Q9H270 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS11Q9H270 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS11Q9H270 AL035425.3-201ENST00000564206 4996 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 RNU6-655P-201ENST00000362858 107 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 RNU6-727P-201ENST00000363592 107 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 Y_RNA.251-201ENST00000364551 99 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 RNU6-407P-201ENST00000365280 104 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 Y_RNA.337-201ENST00000365312 102 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 RNU6-793P-201ENST00000384233 104 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 RNU6-376P-201ENST00000384731 106 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 RNU6-1248P-201ENST00000391096 64 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 SNORA26.3-201ENST00000391119 136 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 U3.40-201ENST00000408706 208 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 AC006461.1-201ENST00000412637 326 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 AL158823.1-201ENST00000418441 478 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 AL139281.1-201ENST00000422120 335 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS11Q9H270 snoU13.22-201ENST00000459428 104 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 AC016632.1-201ENST00000503994 196 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS11Q9H270 RNU6-561P-201ENST00000516222 102 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 RNA5SP76-201ENST00000516277 87 ntBASIC3.02□□□□□ -1.93
VPS11Q9H270 SNORA31.16-201ENST00000516773 139 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms