Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RNU2-70P-201ENST00000410718 179 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 AC016909.1-201ENST00000415916 166 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 AL133547.1-201ENST00000448546 220 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 RPL23AP91-201ENST00000569211 455 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 AC105245.1-201ENST00000581934 244 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 MIR3199-1-201ENST00000582434 88 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 MIR4438-201ENST00000585271 93 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 AL929325.1-201ENST00000603096 117 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 GABRG2-229ENST00000641017 3628 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 RNU6-235P-201ENST00000362644 107 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 Y_RNA.203-201ENST00000364106 102 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 SNORD46.1-201ENST00000364139 104 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 RNU6-743P-201ENST00000364151 106 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 RNU6-546P-201ENST00000383991 107 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 RNU6-484P-201ENST00000384016 107 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 Y_RNA.563-201ENST00000384707 108 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 RNU2-32P-201ENST00000411193 191 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 AC126124.2-201ENST00000413542 321 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 GOT2P5-201ENST00000433995 546 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 RN7SL594P-201ENST00000470590 287 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 SCARNA3-201ENST00000517097 143 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 AC022149.2-201ENST00000621061 203 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 AP003355.3-201ENST00000623465 114 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 MIR1248-201ENST00000629190 106 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 MIR7515-201ENST00000637837 67 ntBASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.39□□□□□ -1.87
BHLHE41Q9C0J9 AC103988.1-201ENST00000566382 2177 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 SNORA71.3-201ENST00000362582 128 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 RNU1-22P-201ENST00000363334 158 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 RNU6-153P-201ENST00000364422 104 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 Y_RNA.294-201ENST00000364916 102 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 MIR7-3-201ENST00000384898 110 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 MIR1253-201ENST00000408273 105 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 U6atac.2-201ENST00000408644 118 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 AC097462.1-201ENST00000514125 324 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 Y_RNA.692-201ENST00000516627 105 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 RNU7-172P-201ENST00000517125 64 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 AC026333.2-201ENST00000542164 106 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 AL160236.1-201ENST00000556317 195 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 uc_338.4-201ENST00000616635 176 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 AC039056.2-201ENST00000622261 511 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 MFSD8-233ENST00000641482 4860 ntBASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
BHLHE41Q9C0J9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 AL161912.2-201ENST00000565707 3007 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 AC080128.1-201ENST00000474389 1917 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 RNA5SP387-201ENST00000364226 106 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 RNU6-978P-201ENST00000364371 103 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 CD24P4-201ENST00000382840 243 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 Y_RNA.525-201ENST00000384570 113 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 MIR184-201ENST00000384962 84 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 AL161788.1-201ENST00000441805 169 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 RPS4XP11-201ENST00000446897 772 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 RPL27AP5-201ENST00000469428 449 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 SNORA4.4-201ENST00000515921 135 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 AC107294.3-201ENST00000609211 526 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 AC090115.4-201ENST00000609970 188 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 MIR8058-201ENST00000615737 89 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 MIR5739-201ENST00000619803 80 ntBASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
BHLHE41Q9C0J9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BHLHE41Q9C0J9 RNU6-476P-201ENST00000384726 107 ntBASIC3.36□□□□□ -1.87
BHLHE41Q9C0J9 FO393413.1-201ENST00000402892 195 ntBASIC3.36□□□□□ -1.87
BHLHE41Q9C0J9 MICF-203ENST00000432679 129 ntBASIC3.36□□□□□ -1.87
BHLHE41Q9C0J9 AL357552.1-201ENST00000445254 415 ntBASIC3.36□□□□□ -1.87
BHLHE41Q9C0J9 PHBP14-201ENST00000512887 367 ntBASIC3.36□□□□□ -1.87
BHLHE41Q9C0J9 RNA5SP153-201ENST00000516498 76 ntBASIC3.36□□□□□ -1.87
BHLHE41Q9C0J9 Y_RNA.712-201ENST00000517011 92 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms