Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL121890.1-201ENST00000435457 205 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 AL161788.1-201ENST00000441805 169 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 Z96811.1-201ENST00000445880 108 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 RPS29P26-201ENST00000477483 171 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 AC091959.1-201ENST00000495857 238 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 AC023141.11-201ENST00000508864 202 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 AC109329.2-201ENST00000519658 482 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 RPL21P9-201ENST00000556149 474 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 AC130289.1-201ENST00000577321 73 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 AL162424.1-201ENST00000602325 221 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.59□□□□□ -1.99
AMBRA1Q9C0C7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.58□□□□□ -2
AMBRA1Q9C0C7 UBE2WP1-201ENST00000362030 340 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.76-201ENST00000362931 109 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.275-201ENST00000364726 110 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.58□□□□□ -2
AMBRA1Q9C0C7 U3.40-201ENST00000408706 208 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 RNU2-64P-201ENST00000411315 191 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 AL139156.1-201ENST00000412785 841 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 EEF1A1P41-201ENST00000414667 207 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 CYP2C59P-201ENST00000457790 269 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 SRIP1-201ENST00000489235 288 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 CKS1BP2-201ENST00000497342 240 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 YWHAEP4-201ENST00000505390 198 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
AMBRA1Q9C0C7 AC091826.1-201ENST00000514065 313 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 RNU6-138P-201ENST00000515952 107 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 RNU6-237P-201ENST00000515985 71 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 RNU6-436P-201ENST00000516171 114 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 RNA5SP367-201ENST00000516557 118 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
AMBRA1Q9C0C7 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 ZNF861P-201ENST00000588126 639 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 AL033523.1-201ENST00000605153 153 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.58□□□□□ -2
AMBRA1Q9C0C7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
AMBRA1Q9C0C7 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
AMBRA1Q9C0C7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.58□□□□□ -2
AMBRA1Q9C0C7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
AMBRA1Q9C0C7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
AMBRA1Q9C0C7 MIR26A1-201ENST00000362205 77 ntBASIC2.57□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.200-201ENST00000364018 102 ntBASIC2.57□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.57□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.329-201ENST00000365209 107 ntBASIC2.57□□□□□ -2
AMBRA1Q9C0C7 RNU6-546P-201ENST00000383991 107 ntBASIC2.57□□□□□ -2
AMBRA1Q9C0C7 RNU6-1248P-201ENST00000391096 64 ntBASIC2.57□□□□□ -2
AMBRA1Q9C0C7 FO393413.1-201ENST00000402892 195 ntBASIC2.57□□□□□ -2
AMBRA1Q9C0C7 MIR1283-1-201ENST00000408494 87 ntBASIC2.57□□□□□ -2
AMBRA1Q9C0C7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
AMBRA1Q9C0C7 MTND5P15-201ENST00000434246 349 ntBASIC2.57□□□□□ -2
AMBRA1Q9C0C7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.57□□□□□ -2
AMBRA1Q9C0C7 TRBV12-1-201ENST00000479785 344 ntBASIC2.57□□□□□ -2
AMBRA1Q9C0C7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
AMBRA1Q9C0C7 Z82209.1-201ENST00000422141 2135 ntBASIC2.57□□□□□ -2
AMBRA1Q9C0C7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
AMBRA1Q9C0C7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.56□□□□□ -2
AMBRA1Q9C0C7 RNU6-324P-201ENST00000363957 106 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 RNA5SP240-201ENST00000365355 128 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 MIR95-201ENST00000385072 81 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 MIR1185-2-201ENST00000408687 86 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 RNU6-651P-201ENST00000411040 105 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 RNU2-32P-201ENST00000411193 191 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 AL513477.1-202ENST00000417061 214 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.56□□□□□ -2
AMBRA1Q9C0C7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.56□□□□□ -2
AMBRA1Q9C0C7 RNU7-57P-201ENST00000459540 60 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.56□□□□□ -2
AMBRA1Q9C0C7 HMGN2P9-201ENST00000476875 229 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.56□□□□□ -2
AMBRA1Q9C0C7 RNU6-191P-201ENST00000516295 94 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.679-201ENST00000516416 91 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.700-201ENST00000516806 100 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 MIR3145-201ENST00000580727 82 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 MIR4282-201ENST00000583613 67 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 MIR4753-201ENST00000585119 83 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 DEFB117-201ENST00000602356 141 ntBASIC2.56□□□□□ -2
AMBRA1Q9C0C7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
AMBRA1Q9C0C7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
AMBRA1Q9C0C7 RNU4-82P-201ENST00000362443 140 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.82-201ENST00000363000 102 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.92-201ENST00000363043 102 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 RNU4-80P-201ENST00000363200 141 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.117-201ENST00000363294 101 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.235-201ENST00000364412 102 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 SNORD31B-201ENST00000364977 69 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.306-201ENST00000365015 102 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.312-201ENST00000365089 102 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.322-201ENST00000365151 102 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
AMBRA1Q9C0C7 RNU6-662P-201ENST00000384253 104 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.785-201ENST00000384290 109 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 RNU6-1289P-201ENST00000384431 106 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 MIR1298-201ENST00000408783 112 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.590-201ENST00000410140 107 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms