Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 UBL5P4-201ENST00000562584 236 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 MIR3198-2-201ENST00000577868 80 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 SNORD53B-201ENST00000577887 78 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 AC080078.3-201ENST00000605407 463 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 AL080274.1-201ENST00000605565 220 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 MIR1244-1-201ENST00000612829 85 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 AC087588.2-201ENST00000617667 426 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 AC022140.2-201ENST00000623500 188 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 MIR1244-3-201ENST00000635744 85 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 MIR1244-2-201ENST00000636449 85 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 MIR1244-4-202ENST00000636813 85 ntBASIC1.31□□□□□ -2.2
RSPO3Q9BXY4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.31-201ENST00000362574 102 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 U3.9-201ENST00000363823 204 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 SNORD115-32-201ENST00000364079 82 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 MIR489-201ENST00000384923 84 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 MIR29B2-201ENST00000385055 81 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 MIR517C-201ENST00000385103 95 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 RNU2-32P-201ENST00000411193 191 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 RPS26P42-201ENST00000413485 326 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 MTCO2P27-201ENST00000420740 428 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 RPL23AP50-201ENST00000434149 455 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 AC236972.2-201ENST00000434979 310 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 AL035666.1-201ENST00000446195 348 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 AC007215.1-201ENST00000464893 276 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 AP000870.1-201ENST00000472927 406 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 ATP5EP1-201ENST00000510257 156 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 RNU6-1098P-201ENST00000516772 96 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 SNORA48.11-201ENST00000517015 89 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 RNU6-58P-201ENST00000517143 103 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 AC018630.3-201ENST00000542637 96 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 AC091925.1-201ENST00000623204 462 ntBASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RSPO3Q9BXY4 U8.1-201ENST00000362843 134 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.146-201ENST00000363549 102 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.197-201ENST00000364004 102 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 RNU6-694P-201ENST00000364071 147 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 SNORA25B-201ENST00000365507 128 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 SNORA18.2-201ENST00000383865 132 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.557-201ENST00000384680 107 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 RNU6-308P-201ENST00000390957 107 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 MIR190B-201ENST00000401119 79 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 RNU6-1156P-201ENST00000410365 100 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 AC018865.2-201ENST00000423631 129 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 AC096644.2-201ENST00000429278 159 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 MTCO3P8-201ENST00000453691 755 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 HMGN1P13-201ENST00000505795 138 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 RNU7-175P-201ENST00000515915 61 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 AC005899.2-201ENST00000584353 90 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 RMST_6.1-201ENST00000611980 203 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 uc_338.22-201ENST00000622722 187 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 AL160413.1-201ENST00000622780 310 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 AC090574.1-201ENST00000623186 233 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 AC138305.3-201ENST00000624988 240 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 MTND5P16-201ENST00000460269 1703 ntBASIC1.29□□□□□ -2.2
RSPO3Q9BXY4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 ZNF204P-201ENST00000416749 2397 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 RNU6-490P-201ENST00000362985 107 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.80-201ENST00000362996 102 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 SNORD115-8-201ENST00000363856 82 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 RNU6-743P-201ENST00000364151 106 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 SNORD115-38-201ENST00000365037 82 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.395-201ENST00000383945 109 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 RNU6-546P-201ENST00000383991 107 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.485-201ENST00000384395 102 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 MIR10B-201ENST00000385011 110 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 MIR561-201ENST00000385216 97 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 RNU6-159P-201ENST00000391080 106 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 PMCHL1-202ENST00000423102 261 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 AC092423.1-201ENST00000430165 186 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 CBX3P6-201ENST00000430257 527 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 AL137792.2-201ENST00000443484 235 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.639-201ENST00000458981 102 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 SNORA4.4-201ENST00000515921 135 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 RNU6-567P-201ENST00000516746 107 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 Y_RNA.701-201ENST00000516812 110 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 RNU6-667P-201ENST00000517186 102 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 AC022616.8-201ENST00000533569 253 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 AC090517.1-201ENST00000569307 266 ntBASIC1.28□□□□□ -2.2
RSPO3Q9BXY4 AC004584.2-201ENST00000570407 410 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms