Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 MIR1244-4-202ENST00000636813 85 ntBASIC2.24□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.395-201ENST00000383945 109 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-1160P-201ENST00000384546 104 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.557-201ENST00000384680 107 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 MTCYBP4-201ENST00000401524 249 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 RN7SKP223-201ENST00000410582 62 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 EIF1P2-201ENST00000428233 350 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 AC099677.2-201ENST00000436385 175 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 HMGN2P34-201ENST00000437647 269 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-221P-201ENST00000459541 99 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 Y_RNA.718-201ENST00000517110 102 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 AC022868.1-201ENST00000517767 391 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 AL353149.1-201ENST00000610667 244 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 MIR6873-201ENST00000622788 63 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 MTND4LP32-201ENST00000636111 270 ntBASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HERPUD2Q9BSE4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-874P-201ENST00000362390 105 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-1266P-201ENST00000362794 105 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 SNORA33.2-201ENST00000365413 134 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-890P-201ENST00000384121 107 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 MIR625-201ENST00000385047 85 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 MIR559-201ENST00000385188 96 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 MIR548P-201ENST00000408336 84 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 RNU2-7P-201ENST00000410794 178 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 AC113618.1-201ENST00000416747 285 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 AC114482.1-201ENST00000418010 247 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 DPH3P2-201ENST00000422618 250 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 AL358176.2-201ENST00000425769 204 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 CST2P1-201ENST00000425770 87 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 MTND3P2-201ENST00000438452 342 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 RNU7-152P-201ENST00000458982 64 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 AC027575.1-201ENST00000481064 460 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 AC025647.1-201ENST00000517879 253 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 AC091144.1-201ENST00000519573 138 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 AL080274.1-201ENST00000605565 220 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 MIR338-201ENST00000636369 67 ntBASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HERPUD2Q9BSE4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 Y_RNA.128-201ENST00000363391 112 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 SNORA22B-201ENST00000383876 138 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 RNU6-1105P-201ENST00000384774 107 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 Y_RNA.577-201ENST00000384794 101 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 AL023284.1-201ENST00000403956 276 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 MIR1185-2-201ENST00000408687 86 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 RNU6-1001P-201ENST00000411265 100 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 EBAG9P1-201ENST00000418955 543 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 AL163540.1-201ENST00000485382 386 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 RNU1-41P-201ENST00000516161 162 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 RNU1-48P-201ENST00000516400 162 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 SUB1P3-201ENST00000564581 315 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 AC136443.5-201ENST00000603741 370 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 AC010900.2-201ENST00000604508 210 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.15-201ENST00000611544 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.16-201ENST00000613119 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.12-201ENST00000613778 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.20-201ENST00000613956 192 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.9-201ENST00000615427 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.11-201ENST00000616345 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.2-201ENST00000616535 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.3-201ENST00000617785 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.19-201ENST00000618602 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 RNU2-1-201ENST00000618664 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.6-201ENST00000619225 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.5-201ENST00000619465 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 U2.10-201ENST00000620268 191 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 MIR6132-201ENST00000622083 109 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 uc_338.22-201ENST00000622722 187 ntBASIC2.21□□□□□ -2.06
HERPUD2Q9BSE4 Y_RNA.144-201ENST00000363521 113 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 MIR520A-201ENST00000384862 85 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 MT-TR-201ENST00000387439 65 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 RNA5SP213-201ENST00000391031 106 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 RNU6-1156P-201ENST00000410365 100 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 AL139156.1-201ENST00000412785 841 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 UQCRBP2-201ENST00000447827 297 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 AL021397.1-201ENST00000451806 248 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 AC010409.1-201ENST00000487382 476 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 RNU6-470P-201ENST00000515954 104 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms