Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 Y_RNA.140-201ENST00000363474 103 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 RNU6-727P-201ENST00000363592 107 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 RNU6-414P-201ENST00000363705 104 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 RNU6-417P-201ENST00000384712 107 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 RNU2-7P-201ENST00000410794 178 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.88□□□□□ -2.11
SDF4Q9BRK5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.88□□□□□ -2.11
SDF4Q9BRK5 MTCYBP10-201ENST00000424905 650 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 MTND3P10-201ENST00000450967 341 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 RPL26P26-201ENST00000480251 434 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 RPL36AP21-201ENST00000490372 323 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.88□□□□□ -2.11
SDF4Q9BRK5 HSBP1P1-201ENST00000555205 166 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 AC090617.3-201ENST00000573670 475 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 MZT1P2-201ENST00000604387 248 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.88□□□□□ -2.11
SDF4Q9BRK5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.88□□□□□ -2.11
SDF4Q9BRK5 MIR424-201ENST00000362227 98 ntBASIC1.87□□□□□ -2.11
SDF4Q9BRK5 Y_RNA.364-201ENST00000365532 101 ntBASIC1.87□□□□□ -2.11
SDF4Q9BRK5 PDCL2P1-201ENST00000419302 352 ntBASIC1.87□□□□□ -2.11
SDF4Q9BRK5 RPL7P42-201ENST00000481005 679 ntBASIC1.87□□□□□ -2.11
SDF4Q9BRK5 AC103851.1-201ENST00000506833 274 ntBASIC1.87□□□□□ -2.11
SDF4Q9BRK5 Y_RNA.683-201ENST00000516508 93 ntBASIC1.87□□□□□ -2.11
SDF4Q9BRK5 RNU6-307P-201ENST00000516743 106 ntBASIC1.87□□□□□ -2.11
SDF4Q9BRK5 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.87□□□□□ -2.11
SDF4Q9BRK5 PISRT1.1-201ENST00000616930 107 ntBASIC1.87□□□□□ -2.11
SDF4Q9BRK5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.87□□□□□ -2.11
SDF4Q9BRK5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.87□□□□□ -2.11
SDF4Q9BRK5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SDF4Q9BRK5 MTND5P16-201ENST00000460269 1703 ntBASIC1.86□□□□□ -2.11
SDF4Q9BRK5 MTND5P35-201ENST00000557537 1720 ntBASIC1.86□□□□□ -2.11
SDF4Q9BRK5 RNU6-222P-201ENST00000362438 107 ntBASIC1.86□□□□□ -2.11
SDF4Q9BRK5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.86□□□□□ -2.11
SDF4Q9BRK5 RNU6-338P-201ENST00000383888 105 ntBASIC1.86□□□□□ -2.11
SDF4Q9BRK5 Y_RNA.404-201ENST00000383978 102 ntBASIC1.86□□□□□ -2.11
SDF4Q9BRK5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.86□□□□□ -2.11
SDF4Q9BRK5 EIF1P2-201ENST00000428233 350 ntBASIC1.86□□□□□ -2.11
SDF4Q9BRK5 JTBP1-201ENST00000441314 247 ntBASIC1.86□□□□□ -2.11
SDF4Q9BRK5 Y_RNA.638-201ENST00000459374 113 ntBASIC1.86□□□□□ -2.11
SDF4Q9BRK5 CYCSP23-201ENST00000519781 313 ntBASIC1.86□□□□□ -2.11
SDF4Q9BRK5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.86□□□□□ -2.11
SDF4Q9BRK5 SNORA77B-201ENST00000578179 125 ntBASIC1.86□□□□□ -2.11
SDF4Q9BRK5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.86□□□□□ -2.11
SDF4Q9BRK5 AC006026.1-201ENST00000444025 1803 ntBASIC1.86□□□□□ -2.11
SDF4Q9BRK5 SNORA67.5-201ENST00000391036 107 ntBASIC1.85□□□□□ -2.11
SDF4Q9BRK5 SNORA75.4-201ENST00000391278 119 ntBASIC1.85□□□□□ -2.11
SDF4Q9BRK5 RBMX2P4-201ENST00000441256 376 ntBASIC1.85□□□□□ -2.11
SDF4Q9BRK5 AC093023.1-201ENST00000547375 507 ntBASIC1.85□□□□□ -2.11
SDF4Q9BRK5 AP000942.3-201ENST00000603702 160 ntBASIC1.85□□□□□ -2.11
SDF4Q9BRK5 AC016925.2-201ENST00000605108 242 ntBASIC1.85□□□□□ -2.11
SDF4Q9BRK5 SNORA33-201ENST00000363664 130 ntBASIC1.84□□□□□ -2.11
SDF4Q9BRK5 RNU6-457P-201ENST00000363999 107 ntBASIC1.84□□□□□ -2.11
SDF4Q9BRK5 SNORD81.2-201ENST00000365153 76 ntBASIC1.84□□□□□ -2.11
SDF4Q9BRK5 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.84□□□□□ -2.11
SDF4Q9BRK5 RNU6-331P-201ENST00000384724 107 ntBASIC1.84□□□□□ -2.11
SDF4Q9BRK5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SDF4Q9BRK5 SNORA17.3-201ENST00000391159 129 ntBASIC1.84□□□□□ -2.11
SDF4Q9BRK5 MIR1267-201ENST00000408723 78 ntBASIC1.84□□□□□ -2.11
SDF4Q9BRK5 MTND4P18-201ENST00000447010 465 ntBASIC1.84□□□□□ -2.11
SDF4Q9BRK5 Y_RNA.635-201ENST00000459041 101 ntBASIC1.84□□□□□ -2.11
SDF4Q9BRK5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.84□□□□□ -2.11
SDF4Q9BRK5 TPTEP1-208ENST00000636884 213 ntBASIC1.84□□□□□ -2.11
SDF4Q9BRK5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SDF4Q9BRK5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SDF4Q9BRK5 MIR329-1-201ENST00000385028 80 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 RNA5SP467-201ENST00000391274 118 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 AC108667.1-201ENST00000428618 249 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 TOMM22P2-201ENST00000430735 237 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 AC073910.1-201ENST00000445047 438 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 UBE2V1P7-201ENST00000446395 340 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 snoU13.9-201ENST00000458927 103 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.83□□□□□ -2.12
SDF4Q9BRK5 PRDX4P1-201ENST00000507189 574 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 MIR4285-201ENST00000581001 85 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 AC022432.1-201ENST00000595739 310 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.83□□□□□ -2.12
SDF4Q9BRK5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 AC099654.14-201ENST00000638599 341 ntBASIC1.83□□□□□ -2.12
SDF4Q9BRK5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
SDF4Q9BRK5 RNU6-874P-201ENST00000362390 105 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 RNU6-1266P-201ENST00000362794 105 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 RN7SKP101-201ENST00000411376 320 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 AC138393.2-201ENST00000414742 246 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 AL353997.1-201ENST00000432936 108 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 AL603825.1-201ENST00000438481 80 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.82□□□□□ -2.12
SDF4Q9BRK5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.82□□□□□ -2.12
SDF4Q9BRK5 snoU13.27-201ENST00000459278 104 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 AC005908.1-201ENST00000468701 347 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 RPL17P19-201ENST00000489069 552 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 SCARNA16.2-201ENST00000516520 172 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 SNORA20.3-201ENST00000516880 132 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 SNORD53B-201ENST00000577887 78 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.82□□□□□ -2.12
SDF4Q9BRK5 AC125232.2-201ENST00000592457 143 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 AL359075.3-201ENST00000613288 217 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 AC092794.2-201ENST00000620933 563 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 U6.108-201ENST00000637764 58 ntBASIC1.82□□□□□ -2.12
SDF4Q9BRK5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms