Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCN2AQ99250 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN2AQ99250 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 AC093019.1-201ENST00000443135 252 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 HMGN2P18-201ENST00000450680 270 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 RNU7-152P-201ENST00000458982 64 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 SNORA25.14-201ENST00000516481 132 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 AP000648.3-201ENST00000623539 4507 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
SCN2AQ99250 RNU6-545P-201ENST00000362681 104 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 Y_RNA.450-201ENST00000384198 113 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 RNU6-831P-201ENST00000384548 107 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 RNA5SP467-201ENST00000391274 118 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN2AQ99250 RPS4XP11-201ENST00000446897 772 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN2AQ99250 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.28□□□□□ -2.2
SCN2AQ99250 RNU6-1114P-201ENST00000516022 107 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 MIR5094-201ENST00000578766 85 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 AC060780.3-201ENST00000589464 80 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 SNORD11B-201ENST00000607707 90 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 AC022513.1-201ENST00000624512 117 ntBASIC1.28□□□□□ -2.2
SCN2AQ99250 AL159152.1-201ENST00000635019 2587 ntBASIC1.28□□□□□ -2.21
SCN2AQ99250 CASC19-280ENST00000642102 1351 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 Y_RNA.72-201ENST00000362894 103 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 Y_RNA.86-201ENST00000363020 111 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 Y_RNA.88-201ENST00000363029 99 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 RNU1-96P-201ENST00000364163 162 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 Y_RNA.358-201ENST00000365491 99 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 RNU6-975P-201ENST00000384296 105 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 SNORA8-201ENST00000384574 139 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 MIR586-201ENST00000385035 97 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 RNU6-360P-201ENST00000390944 104 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 SNORA67.6-201ENST00000391093 99 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 AC123900.1-201ENST00000420390 96 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 HMGN2P34-201ENST00000437647 269 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 MTCO1P44-201ENST00000441935 243 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 RNU7-94P-201ENST00000459576 63 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 AC092989.1-201ENST00000481235 277 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 RPL30P10-201ENST00000488148 337 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 AC093303.1-201ENST00000514549 295 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 RNA5SP480-201ENST00000516840 109 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 AC026470.2-201ENST00000561492 181 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN2AQ99250 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN2AQ99250 AL512598.1-201ENST00000610158 273 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 RNU4-73P-201ENST00000363164 141 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 Y_RNA.319-201ENST00000365138 92 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 Y_RNA.354-201ENST00000365448 111 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 Y_RNA.577-201ENST00000384794 101 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 UBE2V1P7-201ENST00000446395 340 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 MTND5P5-201ENST00000503764 376 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 SUMO2P18-201ENST00000518873 252 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN2AQ99250 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.27□□□□□ -2.21
SCN2AQ99250 PISRT1.1-201ENST00000616930 107 ntBASIC1.27□□□□□ -2.21
SCN2AQ99250 RNU1-62P-201ENST00000362599 164 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 RNU1-76P-201ENST00000362903 159 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 SNORD81.2-201ENST00000365153 76 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 MRPL35P1-201ENST00000404272 572 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 MIR1267-201ENST00000408723 78 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.26□□□□□ -2.21
SCN2AQ99250 CST2P1-201ENST00000425770 87 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 EIF1P2-201ENST00000428233 350 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 AL445305.1-201ENST00000432577 575 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 PCNPP5-201ENST00000452246 481 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 AC107032.1-201ENST00000485945 480 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 SCARNA16.2-201ENST00000516520 172 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 AC091144.1-201ENST00000519573 138 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 AC233702.2-202ENST00000562547 291 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 MIR4801-201ENST00000582704 82 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 AL773524.1-201ENST00000614065 229 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 AC073544.1-201ENST00000600110 1595 ntBASIC1.26□□□□□ -2.21
SCN2AQ99250 SNORD50.1-201ENST00000362987 71 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 SNORA72.1-201ENST00000363485 129 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 RNU4-42P-201ENST00000364738 142 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 Y_RNA.594-201ENST00000410373 140 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN2AQ99250 SNRPEP8-201ENST00000442866 260 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 RPL7P42-201ENST00000481005 679 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 RNU2-34P-201ENST00000516534 121 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 RNA5SP102-201ENST00000516865 106 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 AC100812.1-201ENST00000607622 580 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 MTND5P35-201ENST00000557537 1720 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 MIR126-201ENST00000362291 85 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 RNU6-23P-201ENST00000363283 107 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 RPL21P1-201ENST00000399532 476 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 RPS20P15-201ENST00000412792 311 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 AF228730.4-201ENST00000421457 183 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 snoU13.6-201ENST00000458785 104 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 snoU13.27-201ENST00000459278 104 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 AC097462.1-201ENST00000514125 324 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 RNU6-856P-201ENST00000516959 98 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.25□□□□□ -2.21
SCN2AQ99250 AL137100.2-201ENST00000555786 315 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.25□□□□□ -2.21
SCN2AQ99250 LARP7P1-201ENST00000605576 316 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms