Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 RNU6-57P-201ENST00000411348 103 ntBASIC1.42□□□□□ -2.18
CCDC7Q96M83 CST2P1-201ENST00000425770 87 ntBASIC1.42□□□□□ -2.18
CCDC7Q96M83 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC7Q96M83 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC7Q96M83 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC7Q96M83 MIR3942-201ENST00000585264 109 ntBASIC1.42□□□□□ -2.18
CCDC7Q96M83 MIR338-201ENST00000636369 67 ntBASIC1.42□□□□□ -2.18
CCDC7Q96M83 AC100810.6-201ENST00000638068 285 ntBASIC1.42□□□□□ -2.18
CCDC7Q96M83 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
CCDC7Q96M83 Y_RNA.89-201ENST00000363031 102 ntBASIC1.41□□□□□ -2.18
CCDC7Q96M83 Y_RNA.295-201ENST00000364918 102 ntBASIC1.41□□□□□ -2.18
CCDC7Q96M83 RNU6-306P-201ENST00000384617 107 ntBASIC1.41□□□□□ -2.18
CCDC7Q96M83 MIR548B-201ENST00000385247 97 ntBASIC1.41□□□□□ -2.18
CCDC7Q96M83 AC009161.1-201ENST00000417306 376 ntBASIC1.41□□□□□ -2.18
CCDC7Q96M83 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC7Q96M83 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC7Q96M83 RPL26P26-201ENST00000480251 434 ntBASIC1.41□□□□□ -2.18
CCDC7Q96M83 RNA5SP481-201ENST00000516814 122 ntBASIC1.41□□□□□ -2.18
CCDC7Q96M83 RNU6-1198P-201ENST00000516904 67 ntBASIC1.41□□□□□ -2.18
CCDC7Q96M83 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.41□□□□□ -2.18
CCDC7Q96M83 AC211469.2-201ENST00000605461 205 ntBASIC1.41□□□□□ -2.18
CCDC7Q96M83 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.41□□□□□ -2.18
CCDC7Q96M83 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC7Q96M83 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC7Q96M83 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.41□□□□□ -2.18
CCDC7Q96M83 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
CCDC7Q96M83 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CCDC7Q96M83 AC100821.1-201ENST00000523153 2479 ntBASIC1.4□□□□□ -2.18
CCDC7Q96M83 snoU2-30.2-201ENST00000362805 70 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 SNORD115-32-201ENST00000364079 82 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 RNU4-40P-201ENST00000364351 143 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 RNU6-541P-201ENST00000384709 110 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 MIR1253-201ENST00000408273 105 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC7Q96M83 SDAD1P3-201ENST00000427380 333 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 FTH1P12-201ENST00000432137 551 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 HMGN2P34-201ENST00000437647 269 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 JTBP1-201ENST00000441314 247 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 AC069257.2-201ENST00000441819 155 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 RPS29P28-201ENST00000446439 141 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 RNU6-1146P-201ENST00000516282 102 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 RNU6-344P-201ENST00000516635 111 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 RNU6-1314P-201ENST00000517139 104 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 RNU6-58P-201ENST00000517143 103 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 MTND1P5-201ENST00000517906 940 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC7Q96M83 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.4□□□□□ -2.19
CCDC7Q96M83 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CCDC7Q96M83 Y_RNA.36-201ENST00000362602 112 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 Y_RNA.67-201ENST00000362870 100 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 SNORA63D-201ENST00000364359 132 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 Y_RNA.319-201ENST00000365138 92 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 RNU6-245P-201ENST00000384020 107 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 SNORA67.2-201ENST00000384300 149 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 Y_RNA.516-201ENST00000384541 124 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 RNU6-417P-201ENST00000384712 107 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 MIR153-2-201ENST00000385225 87 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC7Q96M83 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC7Q96M83 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC7Q96M83 AL445305.1-201ENST00000432577 575 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC7Q96M83 SNORA25.14-201ENST00000516481 132 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC7Q96M83 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC7Q96M83 MIR5000-201ENST00000577717 103 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 SNORA77B-201ENST00000578179 125 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 AP003465.2-201ENST00000602571 373 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 7SK.7-201ENST00000603504 247 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 SNORD11B-201ENST00000607707 90 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 MIR8063-201ENST00000621930 81 ntBASIC1.39□□□□□ -2.19
CCDC7Q96M83 SNORD115-8-201ENST00000363856 82 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 RNU6-271P-201ENST00000363858 105 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 RNU6-534P-201ENST00000364877 106 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 SNORD115-38-201ENST00000365037 82 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 Y_RNA.453-201ENST00000384223 109 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 RPL30P16-201ENST00000419341 429 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 MTATP6P13-201ENST00000438531 667 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 AC073910.1-201ENST00000445047 438 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC7Q96M83 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC7Q96M83 RNU6-864P-201ENST00000516256 108 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.38□□□□□ -2.19
CCDC7Q96M83 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.38□□□□□ -2.19
CCDC7Q96M83 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.38□□□□□ -2.19
CCDC7Q96M83 MIR4273-201ENST00000582824 84 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 AC103810.9-201ENST00000606688 112 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 U4.5-201ENST00000617137 123 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 AC008873.1-201ENST00000625051 138 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 snoZ196.1-201ENST00000625269 89 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC7Q96M83 MIR3662-201ENST00000637030 95 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 ICE2P2-201ENST00000483823 2787 ntBASIC1.38□□□□□ -2.19
CCDC7Q96M83 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC7Q96M83 SNORA33-201ENST00000363664 130 ntBASIC1.37□□□□□ -2.19
CCDC7Q96M83 SNORA72.2-201ENST00000365028 127 ntBASIC1.37□□□□□ -2.19
CCDC7Q96M83 RNU6-1013P-201ENST00000384180 107 ntBASIC1.37□□□□□ -2.19
CCDC7Q96M83 RNU6-831P-201ENST00000384548 107 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms