Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC005668.1-201ENST00000571142 476 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.14□□□□□ -2.23
LINC00477Q96M19 SNORD53B-201ENST00000577887 78 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 UBE2V2P2-201ENST00000587677 504 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 AC083806.3-201ENST00000614016 455 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 AC104260.1-201ENST00000616660 539 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 AC006001.4-201ENST00000622243 395 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 AC130454.1-201ENST00000622948 401 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.14□□□□□ -2.23
LINC00477Q96M19 AC095038.3-201ENST00000634439 195 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 U6.108-201ENST00000637764 58 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 MIR1302-1-201ENST00000637932 143 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 ZNF72P-201ENST00000425869 1908 ntBASIC1.14□□□□□ -2.23
LINC00477Q96M19 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.13□□□□□ -2.23
LINC00477Q96M19 RNU6-112P-201ENST00000363599 104 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 SNORA4.2-201ENST00000365313 147 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 Y_RNA.394-201ENST00000383942 103 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 Y_RNA.496-201ENST00000384444 101 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 RNU6-1026P-201ENST00000384465 108 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 MIR329-1-201ENST00000385028 80 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 RNA5SP467-201ENST00000391274 118 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 SNORA26.9-201ENST00000391322 122 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 MIR190B-201ENST00000401119 79 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 MIR1323-201ENST00000408090 73 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.13□□□□□ -2.23
LINC00477Q96M19 CYCSP49-201ENST00000420810 319 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LINC00477Q96M19 USMG5P1-201ENST00000425964 177 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 HMGN2P34-201ENST00000437647 269 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 AC005002.2-201ENST00000438228 269 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 AC245517.4-201ENST00000448601 281 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.13□□□□□ -2.23
LINC00477Q96M19 RNU1-131P-201ENST00000458943 161 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 Y_RNA.632-201ENST00000459189 102 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 MIR2053-201ENST00000459295 91 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 RNU7-87P-201ENST00000459343 62 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 AC005908.1-201ENST00000468701 347 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 AC022493.2-201ENST00000506122 481 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 AC011406.1-201ENST00000512440 370 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 MIR3683-201ENST00000580847 82 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 AC008873.1-201ENST00000625051 138 ntBASIC1.13□□□□□ -2.23
LINC00477Q96M19 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.13□□□□□ -2.23
LINC00477Q96M19 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
LINC00477Q96M19 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.13□□□□□ -2.23
LINC00477Q96M19 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
LINC00477Q96M19 MIR586-201ENST00000385035 97 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 MIR150-201ENST00000385048 84 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 SNORA12.1-201ENST00000390873 148 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 ELOCP21-201ENST00000412558 336 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC00477Q96M19 RPL30P13-201ENST00000418873 348 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 AF228730.4-201ENST00000421457 183 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC00477Q96M19 OOSP1P1-201ENST00000423265 274 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 AC092423.1-201ENST00000430165 186 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC00477Q96M19 MTND4P18-201ENST00000447010 465 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC00477Q96M19 Y_RNA.635-201ENST00000459041 101 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 RNU7-57P-201ENST00000459540 60 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.12□□□□□ -2.23
LINC00477Q96M19 AC067942.3-201ENST00000512025 362 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC00477Q96M19 RNU7-175P-201ENST00000515915 61 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 Y_RNA.718-201ENST00000517110 102 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 RNU7-128P-201ENST00000517247 62 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.12□□□□□ -2.23
LINC00477Q96M19 AC093023.1-201ENST00000547375 507 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC00477Q96M19 RBM11P1-201ENST00000604951 799 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 AC113139.1-201ENST00000605049 239 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 MIR8074-201ENST00000615081 81 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 AC138305.3-201ENST00000624988 240 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 MIR338-201ENST00000636369 67 ntBASIC1.12□□□□□ -2.23
LINC00477Q96M19 RNU6-593P-201ENST00000364716 112 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 Y_RNA.356-201ENST00000365475 113 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LINC00477Q96M19 RNU6-417P-201ENST00000384712 107 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 MIR320A-201ENST00000385302 82 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 RNU1-139P-201ENST00000391307 165 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 SNORA75.6-201ENST00000391318 127 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 SDAD1P3-201ENST00000427380 333 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 USP9YP16-201ENST00000430287 407 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 AC007677.1-201ENST00000445757 515 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 AC007395.1-201ENST00000451333 677 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 USP9YP23-201ENST00000455085 407 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC00477Q96M19 RN7SKP210-201ENST00000459176 261 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 RNU6-344P-201ENST00000516635 111 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 AC025647.1-201ENST00000517879 253 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 AC134698.4-201ENST00000523451 826 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC00477Q96M19 RAB11AP2-201ENST00000545905 639 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.11□□□□□ -2.23
LINC00477Q96M19 AC026470.2-201ENST00000561492 181 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 AC015720.1-201ENST00000565251 277 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 AC004584.2-201ENST00000570407 410 ntBASIC1.11□□□□□ -2.23
LINC00477Q96M19 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.11□□□□□ -2.23
LINC00477Q96M19 Y_RNA.804-201ENST00000615262 101 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms