Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 MIR335-201ENST00000362173 94 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 RNU1-62P-201ENST00000362599 164 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 SNORD81.1-201ENST00000363064 77 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 Y_RNA.101-201ENST00000363154 102 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 SNORD32B-201ENST00000364460 84 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 SNORA68.1-201ENST00000364537 132 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 Y_RNA.415-201ENST00000384012 112 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 RNU1-138P-201ENST00000384093 164 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 Y_RNA.489-201ENST00000384410 101 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 MIR218-1-201ENST00000384999 110 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.57□□□□□ -2
CCDC17Q96LX7 AL033519.2-201ENST00000403958 392 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 RNU5A-5P-201ENST00000411054 116 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.57□□□□□ -2
CCDC17Q96LX7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.57□□□□□ -2
CCDC17Q96LX7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.57□□□□□ -2
CCDC17Q96LX7 IFNA11P-201ENST00000446352 526 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 AC090515.1-201ENST00000465295 476 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 UBL5P3-201ENST00000475112 231 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 HMGB3P17-201ENST00000504195 649 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 RNA5SP112-201ENST00000515937 99 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 RNU6-1023P-201ENST00000516137 106 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 RN7SKP40-201ENST00000517211 242 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.57□□□□□ -2
CCDC17Q96LX7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.57□□□□□ -2
CCDC17Q96LX7 TCL6_2.1-201ENST00000615162 119 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 MIR6715A-201ENST00000615929 79 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 AC005562.2-201ENST00000618264 111 ntBASIC2.57□□□□□ -2
CCDC17Q96LX7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC17Q96LX7 SNORD114-1-201ENST00000362705 72 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 RNU6-944P-201ENST00000364023 107 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 Y_RNA.257-201ENST00000364596 102 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 SNORA20.1-201ENST00000364790 130 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 SNORD87-201ENST00000364849 89 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 RNU6-1175P-201ENST00000365200 107 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 SNORA67.2-201ENST00000384300 149 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 Y_RNA.498-201ENST00000384460 102 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 SNORA64-201ENST00000384674 134 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 Y_RNA.597-201ENST00000410463 100 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
CCDC17Q96LX7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.56□□□□□ -2
CCDC17Q96LX7 UQCRBP2-201ENST00000447827 297 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 RPL23AP3-201ENST00000453844 468 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 SEPT14P8-201ENST00000508026 178 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.56□□□□□ -2
CCDC17Q96LX7 AC074133.1-201ENST00000515696 183 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 MIR449C-201ENST00000516047 92 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 RNU7-110P-201ENST00000516891 62 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 RNU6-111P-201ENST00000517179 105 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 MIR4643-201ENST00000577473 78 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 MIR5006-201ENST00000583027 110 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 AL713866.2-201ENST00000603579 219 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 SNORD113-5-201ENST00000607261 78 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 AC011373.1-201ENST00000607270 237 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
CCDC17Q96LX7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.56□□□□□ -2
CCDC17Q96LX7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CCDC17Q96LX7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC17Q96LX7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CCDC17Q96LX7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
CCDC17Q96LX7 RNU6-486P-201ENST00000363116 107 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC17Q96LX7 Y_RNA.446-201ENST00000384178 104 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 MT-TR-201ENST00000387439 65 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 AL603910.2-201ENST00000407268 136 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 RNU6-1199P-201ENST00000411249 104 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.55□□□□□ -2
CCDC17Q96LX7 RAB28P5-201ENST00000427490 651 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 MICF-203ENST00000432679 129 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 RNU6-625P-201ENST00000459412 107 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC17Q96LX7 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 MIR3668-201ENST00000582138 75 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 AC005176.2-201ENST00000596933 147 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 AC008749.1-201ENST00000597650 306 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 AC004467.1-201ENST00000615678 330 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 AC127459.3-201ENST00000624328 466 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 AC090517.3-201ENST00000625170 141 ntBASIC2.55□□□□□ -2
CCDC17Q96LX7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.55□□□□□ -2
CCDC17Q96LX7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC17Q96LX7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC17Q96LX7 Y_RNA.20-201ENST00000362479 113 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 RNU4-90P-201ENST00000362773 141 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 RNU5F-3P-201ENST00000363767 117 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 SNORD27-201ENST00000363981 72 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 Y_RNA.230-201ENST00000364348 109 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 Y_RNA.416-201ENST00000384014 113 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 MIR627-201ENST00000384979 97 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC17Q96LX7 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 RNU2-14P-201ENST00000411053 191 ntBASIC2.54□□□□□ -2
CCDC17Q96LX7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.54□□□□□ -2
CCDC17Q96LX7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.54□□□□□ -2
CCDC17Q96LX7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 246.3 ms