Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AL162413.1-201ENST00000603198 110 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 AL390123.1-201ENST00000603216 237 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 MIR6078-201ENST00000611069 100 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 AL391987.6-201ENST00000305671 199 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 U3.8-201ENST00000363675 217 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 RNU6-137P-201ENST00000363680 108 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 Y_RNA.319-201ENST00000365138 92 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 RNU6-95P-201ENST00000384697 107 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 MIR153-2-201ENST00000385225 87 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 AL356776.1-201ENST00000406574 447 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 MIR1185-2-201ENST00000408687 86 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 RNU6-908P-201ENST00000410160 94 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 RN7SKP200-201ENST00000410564 320 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 AP1B1P2-201ENST00000416196 106 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 DAP3P1-201ENST00000441522 278 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 MTND1P11-201ENST00000456661 876 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 AC108729.3-201ENST00000513484 108 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 RNU6-1281P-201ENST00000516223 105 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 SNORA25.14-201ENST00000516481 132 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 RNA5SP454-201ENST00000517231 127 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 AC027288.2-201ENST00000553028 243 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 ZNF519P2-201ENST00000557032 169 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 POLR3GP2-201ENST00000588366 668 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 AL138726.1-201ENST00000614873 333 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 MIR8054-201ENST00000620877 86 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 AC099654.12-201ENST00000639868 649 ntBASIC0.98□□□□□ -2.25
PKNOX2Q96KN3 SNORD87-201ENST00000364849 89 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 Y_RNA.338-201ENST00000365320 114 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 SNORD116-1-201ENST00000384335 95 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 RNU6-780P-201ENST00000391030 104 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 Y_RNA.615-201ENST00000410769 117 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 Z82205.1-201ENST00000428456 297 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 AC005002.2-201ENST00000438228 269 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 Y_RNA.638-201ENST00000459374 113 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 HMGN2P26-201ENST00000463169 339 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 RPL39P38-201ENST00000467018 153 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 AL163540.1-201ENST00000485382 386 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 RNU7-128P-201ENST00000517247 62 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 AK6P2-201ENST00000549020 471 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 AL137100.2-201ENST00000555786 315 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 AC004584.2-201ENST00000570407 410 ntBASIC0.97□□□□□ -2.25
PKNOX2Q96KN3 MTND4P12-201ENST00000498999 1377 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 Y_RNA.51-201ENST00000362725 102 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 RNU6-483P-201ENST00000384088 108 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 MIR222-201ENST00000384992 110 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 MRPL42P3-201ENST00000401492 326 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 AL590632.1-201ENST00000424289 371 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 Y_RNA.704-201ENST00000516851 102 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 SNORA70.22-201ENST00000517160 124 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 AC022432.1-201ENST00000595739 310 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 U6.73-201ENST00000619194 103 ntBASIC0.96□□□□□ -2.26
PKNOX2Q96KN3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 RNU6-1252P-201ENST00000363054 104 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 RNU6-873P-201ENST00000363833 107 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 Y_RNA.530-201ENST00000384587 101 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 MIR517A-201ENST00000385001 87 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 RNU6-1186P-201ENST00000410429 97 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 RNU6-733P-201ENST00000410759 104 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 ZNF885P-201ENST00000420174 1098 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 AC245047.3-201ENST00000429428 127 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 MTCO3P18-201ENST00000440206 761 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 RNU7-66P-201ENST00000459469 62 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 ACA59.1-201ENST00000515966 143 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 RNU7-99P-201ENST00000516271 62 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 NBR2-204ENST00000587322 63 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 AC068647.2-201ENST00000637380 353 ntBASIC0.95□□□□□ -2.26
PKNOX2Q96KN3 RNU6-1266P-201ENST00000362794 105 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 Y_RNA.135-201ENST00000363439 95 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 Y_RNA.256-201ENST00000364594 104 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 Y_RNA.415-201ENST00000384012 112 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 RNU6-17P-201ENST00000384245 107 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 RNU6-18P-201ENST00000384527 107 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 RNU6-440P-201ENST00000390882 105 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 RNU6-159P-201ENST00000391080 106 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 RNU2-16P-201ENST00000410712 136 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 AC092473.1-201ENST00000441098 221 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 RNU6-351P-201ENST00000516097 100 ntBASIC0.94□□□□□ -2.26
PKNOX2Q96KN3 RNU6-256P-201ENST00000516747 97 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms