Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 RNU6-545P-201ENST00000362681 104 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 SNORD115-30-201ENST00000364117 82 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 MIR548B-201ENST00000385247 97 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 RNU4-61P-201ENST00000411243 107 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 AC074198.2-201ENST00000508153 258 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 RNA5SP112-201ENST00000515937 99 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 RNU6-255P-201ENST00000516957 105 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 AC087441.2-201ENST00000529141 262 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.67□□□□□ -1.98
PTCD3Q96EY7 AC010620.2-201ENST00000600135 313 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 AL008718.3-201ENST00000610217 321 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 AC008873.1-201ENST00000625051 138 ntBASIC2.67□□□□□ -1.98
PTCD3Q96EY7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.67□□□□□ -1.98
PTCD3Q96EY7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
PTCD3Q96EY7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PTCD3Q96EY7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.66□□□□□ -1.98
PTCD3Q96EY7 U3.8-201ENST00000363675 217 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 RNU6-1020P-201ENST00000363684 107 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 RNU6-923P-201ENST00000364753 107 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 RNU6-211P-201ENST00000384047 107 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 Y_RNA.464-201ENST00000384282 110 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 MIR634-201ENST00000385208 97 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 MIR548M-201ENST00000408260 86 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 RN7SKP51-201ENST00000410781 304 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.66□□□□□ -1.98
PTCD3Q96EY7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
PTCD3Q96EY7 UBBP3-201ENST00000445497 241 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.66□□□□□ -1.98
PTCD3Q96EY7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 Y_RNA.637-201ENST00000459424 114 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 MIR4308-201ENST00000580634 81 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 AC006380.1-201ENST00000603598 186 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 AL365265.1-201ENST00000621045 234 ntBASIC2.66□□□□□ -1.98
PTCD3Q96EY7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.66□□□□□ -1.98
PTCD3Q96EY7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PTCD3Q96EY7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PTCD3Q96EY7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.65□□□□□ -1.99
PTCD3Q96EY7 RNU6-1272P-201ENST00000362776 107 ntBASIC2.65□□□□□ -1.99
PTCD3Q96EY7 RNU6-944P-201ENST00000364023 107 ntBASIC2.65□□□□□ -1.99
PTCD3Q96EY7 SNORD56.5-201ENST00000364281 72 ntBASIC2.65□□□□□ -1.99
PTCD3Q96EY7 Y_RNA.304-201ENST00000365011 112 ntBASIC2.65□□□□□ -1.99
PTCD3Q96EY7 OOSP1P1-201ENST00000423265 274 ntBASIC2.65□□□□□ -1.99
PTCD3Q96EY7 AL135790.2-201ENST00000437701 267 ntBASIC2.65□□□□□ -1.99
PTCD3Q96EY7 AC140059.1-201ENST00000489238 361 ntBASIC2.65□□□□□ -1.99
PTCD3Q96EY7 MIR449C-201ENST00000516047 92 ntBASIC2.65□□□□□ -1.99
PTCD3Q96EY7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PTCD3Q96EY7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.65□□□□□ -1.99
PTCD3Q96EY7 AC072026.1-201ENST00000605023 201 ntBASIC2.65□□□□□ -1.99
PTCD3Q96EY7 RPL17P51-201ENST00000605218 238 ntBASIC2.65□□□□□ -1.99
PTCD3Q96EY7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.65□□□□□ -1.99
PTCD3Q96EY7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PTCD3Q96EY7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PTCD3Q96EY7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PTCD3Q96EY7 AC138915.1-201ENST00000565427 1685 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 RNU6-653P-201ENST00000363074 106 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 RNU6-486P-201ENST00000363116 107 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 RNU6-774P-201ENST00000363238 107 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 RNU6-324P-201ENST00000363957 106 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 MIR29B2-201ENST00000385055 81 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 AL031003.1-201ENST00000404229 172 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 RNA5SP181-201ENST00000410246 98 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 AL513477.1-202ENST00000417061 214 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 TOMM22P2-201ENST00000430735 237 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 AC087499.2-201ENST00000432861 149 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.64□□□□□ -1.99
PTCD3Q96EY7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 AL135938.1-201ENST00000443141 297 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.64□□□□□ -1.99
PTCD3Q96EY7 RNU6-1212P-201ENST00000517023 104 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.64□□□□□ -1.99
PTCD3Q96EY7 AL137100.2-201ENST00000555786 315 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 AL713866.2-201ENST00000603579 219 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 AL670379.2-201ENST00000604983 252 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.64□□□□□ -1.99
PTCD3Q96EY7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 AC090517.3-201ENST00000625170 141 ntBASIC2.64□□□□□ -1.99
PTCD3Q96EY7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PTCD3Q96EY7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PTCD3Q96EY7 RNU6-801P-201ENST00000364087 105 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 Y_RNA.233-201ENST00000364407 101 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 Y_RNA.308-201ENST00000365043 101 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 Y_RNA.361-201ENST00000365515 120 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 MIR586-201ENST00000385035 97 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 AL138827.1-201ENST00000402666 306 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
PTCD3Q96EY7 AC024067.1-201ENST00000426199 223 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 BTF3P11-201ENST00000426582 477 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 MICF-203ENST00000432679 129 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 CR769767.1-201ENST00000436337 346 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.63□□□□□ -1.99
PTCD3Q96EY7 U8.19-201ENST00000459095 133 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 HMGN2P9-201ENST00000476875 229 ntBASIC2.63□□□□□ -1.99
PTCD3Q96EY7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms