Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 AL365434.2-201ENST00000607979 234 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 AC090517.2-201ENST00000614966 680 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 AC104260.1-201ENST00000616660 539 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 MTND5P35-201ENST00000557537 1720 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 RNU6-192P-201ENST00000391253 100 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 AL117342.1-201ENST00000404861 406 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.2□□□□□ -2.22
PHF3Q92576 AC074133.1-201ENST00000515696 183 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 RNU6-1041P-201ENST00000516254 102 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 RNU1-54P-201ENST00000517181 120 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.2□□□□□ -2.22
PHF3Q92576 AC068790.6-201ENST00000602558 258 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.2□□□□□ -2.22
PHF3Q92576 AC095038.3-201ENST00000634439 195 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.19□□□□□ -2.22
PHF3Q92576 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
PHF3Q92576 RNU6-596P-201ENST00000365395 98 ntBASIC1.19□□□□□ -2.22
PHF3Q92576 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.19□□□□□ -2.22
PHF3Q92576 MIR1277-201ENST00000408536 78 ntBASIC1.19□□□□□ -2.22
PHF3Q92576 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.19□□□□□ -2.22
PHF3Q92576 RNU6-329P-201ENST00000459618 107 ntBASIC1.19□□□□□ -2.22
PHF3Q92576 RNU7-175P-201ENST00000515915 61 ntBASIC1.19□□□□□ -2.22
PHF3Q92576 AL355802.3-201ENST00000607571 545 ntBASIC1.19□□□□□ -2.22
PHF3Q92576 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.19□□□□□ -2.22
PHF3Q92576 AL078596.1-201ENST00000624856 447 ntBASIC1.19□□□□□ -2.22
PHF3Q92576 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.19□□□□□ -2.22
PHF3Q92576 SNORD50.1-201ENST00000362987 71 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 Y_RNA.301-201ENST00000364990 103 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 MIR499A-201ENST00000384903 122 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 AL442163.3-201ENST00000554110 156 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 AC093913.1-201ENST00000614178 329 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.18□□□□□ -2.22
PHF3Q92576 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
PHF3Q92576 Y_RNA.287-201ENST00000364853 94 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 RNU6-950P-201ENST00000384651 107 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.18□□□□□ -2.22
PHF3Q92576 AC245047.3-201ENST00000429428 127 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 AL163195.1-201ENST00000496941 348 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 AC093303.1-201ENST00000514549 295 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 RNA5SP481-201ENST00000516814 122 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 RNA5SP102-201ENST00000516865 106 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 MIR4742-201ENST00000581069 85 ntBASIC1.18□□□□□ -2.22
PHF3Q92576 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
PHF3Q92576 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PHF3Q92576 RNU4-9P-201ENST00000364951 139 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 Y_RNA.327-201ENST00000365201 102 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 MIR32-201ENST00000384965 70 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 MIR487A-201ENST00000385009 80 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.17□□□□□ -2.22
PHF3Q92576 RPL30P10-201ENST00000488148 337 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 RNU6-718P-201ENST00000516166 105 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 RNU6-1016P-201ENST00000516689 94 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.17□□□□□ -2.22
PHF3Q92576 MIR4273-201ENST00000582824 84 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 AC126177.8-201ENST00000618339 1015 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 AC008873.1-201ENST00000625051 138 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.17□□□□□ -2.22
PHF3Q92576 MIR338-201ENST00000636369 67 ntBASIC1.17□□□□□ -2.22
PHF3Q92576 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 Y_RNA.269-201ENST00000364685 89 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 RNU6-203P-201ENST00000384038 104 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 RNU6-842P-201ENST00000384269 107 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 RNU6-296P-201ENST00000384608 107 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
PHF3Q92576 FCF1P9-201ENST00000412546 282 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 RPS20P15-201ENST00000412792 311 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 AL445305.1-201ENST00000432577 575 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 AC245517.4-201ENST00000448601 281 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.16□□□□□ -2.22
PHF3Q92576 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 RPL17P19-201ENST00000489069 552 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 AC097462.1-201ENST00000514125 324 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 RNU1-142P-201ENST00000516682 145 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 CBX3P8-201ENST00000532412 525 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.16□□□□□ -2.22
PHF3Q92576 AL359075.3-201ENST00000613288 217 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
PHF3Q92576 AL121890.5-201ENST00000620848 304 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 AC006435.5-201ENST00000624486 112 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
PHF3Q92576 RNU6-505P-201ENST00000384427 107 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 Y_RNA.508-201ENST00000384502 114 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 MIR513A1-201ENST00000385138 129 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 RNU6-1186P-201ENST00000410429 97 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 RNU6-955P-201ENST00000410497 104 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 RNU6-1114P-201ENST00000516022 107 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 MIR4709-201ENST00000577272 72 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 MIR4285-201ENST00000581001 85 ntBASIC1.16□□□□□ -2.22
PHF3Q92576 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.16□□□□□ -2.22
PHF3Q92576 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.16□□□□□ -2.22
PHF3Q92576 RNU6-595P-201ENST00000363944 107 ntBASIC1.15□□□□□ -2.22
PHF3Q92576 Y_RNA.415-201ENST00000384012 112 ntBASIC1.15□□□□□ -2.22
PHF3Q92576 RNU6-601P-201ENST00000384540 107 ntBASIC1.15□□□□□ -2.22
PHF3Q92576 AL356776.1-201ENST00000406574 447 ntBASIC1.15□□□□□ -2.22
PHF3Q92576 MTCYBP10-201ENST00000424905 650 ntBASIC1.15□□□□□ -2.22
PHF3Q92576 USP9YP30-201ENST00000430729 455 ntBASIC1.15□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms