Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU1-91P-201ENST00000364746 163 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 RNU6-326P-201ENST00000365480 107 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 Y_RNA.415-201ENST00000384012 112 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 Y_RNA.477-201ENST00000384352 108 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 SNORA53-201ENST00000391141 249 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 RNU4-30P-201ENST00000410245 143 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 AL356320.1-201ENST00000429616 163 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 AC080013.2-201ENST00000460866 323 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 Y_RNA.673-201ENST00000516306 88 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 AL713866.2-201ENST00000603579 219 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 AC090517.3-201ENST00000625170 141 ntBASIC3.05□□□□□ -1.92
RTF1Q92541 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RTF1Q92541 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.04□□□□□ -1.92
RTF1Q92541 Y_RNA.286-201ENST00000364813 102 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 SNORA72.2-201ENST00000365028 127 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 DEFA7P-201ENST00000382676 285 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 RNU6-1264P-201ENST00000383891 107 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 Y_RNA.597-201ENST00000410463 100 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 RN7SKP192-201ENST00000411291 327 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 AC005042.3-201ENST00000453230 174 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 RNU2-31P-201ENST00000516954 155 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 AC018630.3-201ENST00000542637 96 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 AC105245.1-201ENST00000581934 244 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 MIR5007-201ENST00000583098 95 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 AC069294.1-201ENST00000608397 350 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 AL590240.4-201ENST00000616908 390 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 MIR3674-201ENST00000636576 68 ntBASIC3.04□□□□□ -1.92
RTF1Q92541 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.03□□□□□ -1.92
RTF1Q92541 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
RTF1Q92541 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RTF1Q92541 Y_RNA.331-201ENST00000365267 102 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 SNORD58.1-201ENST00000391313 66 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 RNA5SP504-201ENST00000410676 117 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 RPS15AP28-201ENST00000435088 386 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 NDUFB4P10-201ENST00000452541 359 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 HMGB3P17-201ENST00000504195 649 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 RPPH1-2P-201ENST00000516688 293 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 RNU6-586P-201ENST00000517265 104 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.03□□□□□ -1.92
RTF1Q92541 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.03□□□□□ -1.92
RTF1Q92541 AC055872.1-201ENST00000570978 278 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 MIR3199-1-201ENST00000582434 88 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 AC037487.3-201ENST00000606668 112 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.03□□□□□ -1.92
RTF1Q92541 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 AC078938.1-201ENST00000620993 318 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 AC008873.1-201ENST00000625051 138 ntBASIC3.03□□□□□ -1.92
RTF1Q92541 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
RTF1Q92541 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
RTF1Q92541 Z82209.1-201ENST00000422141 2135 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.02□□□□□ -1.93
RTF1Q92541 AC080128.1-201ENST00000474389 1917 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 MIR21-201ENST00000362134 72 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 SNORA67.2-201ENST00000384300 149 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 RNU6-1274P-201ENST00000384557 107 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 Y_RNA.569-201ENST00000384749 103 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RTF1Q92541 AL139095.1-201ENST00000404326 391 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 AL603910.2-201ENST00000407268 136 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 MIR1294-201ENST00000408503 142 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 RNA5SP475-201ENST00000410568 110 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.02□□□□□ -1.93
RTF1Q92541 SCARNA24.2-201ENST00000516968 130 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.02□□□□□ -1.93
RTF1Q92541 AC008749.1-201ENST00000597650 306 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 BX284668.6-201ENST00000606899 438 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 AC004467.1-201ENST00000615678 330 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 U2.14-201ENST00000615943 113 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 AC006001.4-201ENST00000622243 395 ntBASIC3.02□□□□□ -1.93
RTF1Q92541 Y_RNA.515-201ENST00000384535 112 ntBASIC3.01□□□□□ -1.93
RTF1Q92541 MIR218-1-201ENST00000384999 110 ntBASIC3.01□□□□□ -1.93
RTF1Q92541 RN7SKP223-201ENST00000410582 62 ntBASIC3.01□□□□□ -1.93
RTF1Q92541 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.01□□□□□ -1.93
RTF1Q92541 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.01□□□□□ -1.93
RTF1Q92541 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.01□□□□□ -1.93
RTF1Q92541 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.01□□□□□ -1.93
RTF1Q92541 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.01□□□□□ -1.93
RTF1Q92541 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RTF1Q92541 AC091932.3-201ENST00000624223 323 ntBASIC3.01□□□□□ -1.93
RTF1Q92541 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.01□□□□□ -1.93
RTF1Q92541 MIR6073-201ENST00000352083 89 ntBASIC3□□□□□ -1.93
RTF1Q92541 RNU6-1266P-201ENST00000362794 105 ntBASIC3□□□□□ -1.93
RTF1Q92541 Y_RNA.101-201ENST00000363154 102 ntBASIC3□□□□□ -1.93
RTF1Q92541 Y_RNA.136-201ENST00000363444 102 ntBASIC3□□□□□ -1.93
RTF1Q92541 U3.8-201ENST00000363675 217 ntBASIC3□□□□□ -1.93
RTF1Q92541 RNU6-1026P-201ENST00000384465 108 ntBASIC3□□□□□ -1.93
RTF1Q92541 MIR586-201ENST00000385035 97 ntBASIC3□□□□□ -1.93
RTF1Q92541 MIR1261-201ENST00000408659 82 ntBASIC3□□□□□ -1.93
RTF1Q92541 RNU2-54P-201ENST00000410299 190 ntBASIC3□□□□□ -1.93
RTF1Q92541 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3□□□□□ -1.93
RTF1Q92541 RNU5F-4P-201ENST00000516581 114 ntBASIC3□□□□□ -1.93
RTF1Q92541 RNU6-1098P-201ENST00000516772 96 ntBASIC3□□□□□ -1.93
RTF1Q92541 RNU6-111P-201ENST00000517179 105 ntBASIC3□□□□□ -1.93
RTF1Q92541 RN7SKP40-201ENST00000517211 242 ntBASIC3□□□□□ -1.93
RTF1Q92541 AP002001.1-203ENST00000534002 267 ntBASIC3□□□□□ -1.93
RTF1Q92541 MIR1273D-201ENST00000577266 86 ntBASIC3□□□□□ -1.93
RTF1Q92541 AC010900.2-201ENST00000604508 210 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms