Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU4-61P-201ENST00000411243 107 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 WARS2P1-201ENST00000429678 537 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 Z82188.1-201ENST00000436709 154 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.22□□□□□ -2.05
SNED1Q8TER0 AL139109.1-201ENST00000455491 297 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 PRELID3BP1-201ENST00000457142 540 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 RNU7-26P-201ENST00000458980 63 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 U8.22-201ENST00000459141 133 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 RNU7-95P-201ENST00000459222 64 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.22□□□□□ -2.05
SNED1Q8TER0 SNORA31.15-201ENST00000516771 132 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 SNORD19.2-201ENST00000516978 73 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 MRPS36P4-201ENST00000534436 298 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 CBX3P4-201ENST00000538909 354 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.22□□□□□ -2.05
SNED1Q8TER0 AC098479.1-201ENST00000609225 154 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 MIR8081-201ENST00000611533 95 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 AP000553.5-201ENST00000641933 54 ntBASIC2.22□□□□□ -2.05
SNED1Q8TER0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNED1Q8TER0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNED1Q8TER0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SNED1Q8TER0 RNU6-105P-201ENST00000363909 104 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 RNU4-9P-201ENST00000364951 139 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 Y_RNA.352-201ENST00000365439 102 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNED1Q8TER0 AL603910.2-201ENST00000407268 136 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 AP000275.1-201ENST00000411943 390 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.21□□□□□ -2.06
SNED1Q8TER0 RPL26P27-201ENST00000414397 437 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 PIGPP3-201ENST00000425307 415 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNED1Q8TER0 RPL23AP75-201ENST00000491601 451 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 SNORA31.6-201ENST00000516241 130 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 RNU6-1338P-201ENST00000516328 91 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 SNORA31.11-201ENST00000516528 139 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 SNORA43.2-201ENST00000516652 128 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 RNU6-703P-201ENST00000516946 107 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 SCARNA24.2-201ENST00000516968 130 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 AC022868.1-201ENST00000517767 391 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.21□□□□□ -2.06
SNED1Q8TER0 AC090617.3-201ENST00000573670 475 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 AC136932.1-201ENST00000574771 208 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 MIR4300-201ENST00000581016 96 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.21□□□□□ -2.06
SNED1Q8TER0 AC240442.1-201ENST00000616055 283 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 AC097372.5-201ENST00000623665 376 ntBASIC2.21□□□□□ -2.06
SNED1Q8TER0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.21□□□□□ -2.06
SNED1Q8TER0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.21□□□□□ -2.06
SNED1Q8TER0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.21□□□□□ -2.06
SNED1Q8TER0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNED1Q8TER0 SNORA67.1-201ENST00000364749 141 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 Y_RNA.277-201ENST00000364754 102 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 Y_RNA.785-201ENST00000384290 109 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 RNU6-658P-201ENST00000384606 106 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 MIR524-201ENST00000385242 87 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SNED1Q8TER0 Y_RNA.602-201ENST00000410535 92 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.2□□□□□ -2.06
SNED1Q8TER0 AC016700.2-201ENST00000446011 156 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 AC006026.2-201ENST00000457376 180 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 AC023141.11-201ENST00000508864 202 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 RNU6-1183P-201ENST00000517054 60 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 SNORA81.3-201ENST00000517283 198 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 AL137100.2-201ENST00000555786 315 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 MIR4659A-201ENST00000580269 81 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 AC009779.6-201ENST00000603972 165 ntBASIC2.2□□□□□ -2.06
SNED1Q8TER0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.2□□□□□ -2.06
SNED1Q8TER0 Y_RNA.16-201ENST00000362421 102 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 SNORD81.1-201ENST00000363064 77 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 RNU6-898P-201ENST00000365627 104 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 RNU6-968P-201ENST00000384076 107 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 Y_RNA.462-201ENST00000384268 102 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 MIR32-201ENST00000384965 70 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 MIR548M-201ENST00000408260 86 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 RNU2-14P-201ENST00000411053 191 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 RNU6-1245P-201ENST00000411130 106 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.19□□□□□ -2.06
SNED1Q8TER0 RPS27AP10-201ENST00000496103 208 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 RNU6-1012P-201ENST00000516606 109 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 SCARNA3-201ENST00000517097 143 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 AC130289.1-201ENST00000577321 73 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 MIR5571-201ENST00000577998 113 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 AC010928.2-201ENST00000588017 287 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 AL512605.2-201ENST00000592972 256 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 AL391813.1-201ENST00000603098 260 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 BX284668.6-201ENST00000606899 438 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 AC011476.5-201ENST00000615594 130 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 MIR203B-201ENST00000636080 86 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 U2.21-201ENST00000637295 81 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNED1Q8TER0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SNED1Q8TER0 Z82195.2-201ENST00000612348 18351 ntBASIC2.19□□□□□ -2.06
SNED1Q8TER0 RNU6-1301P-201ENST00000362724 104 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 RNU6-778P-201ENST00000363269 103 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 SNORD113-8-201ENST00000363497 74 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 RNU6-280P-201ENST00000364145 104 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 RNU6-879P-201ENST00000364328 108 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
SNED1Q8TER0 Z98749.2-208ENST00000381646 500 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms