Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AC243428.1-201ENST00000421099 264 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.03□□□□□ -2.24
LINC01560Q8TB33 RPS29P1-201ENST00000465274 159 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 SNORA25.14-201ENST00000516481 132 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 RNA5SP481-201ENST00000516814 122 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 AC025647.1-201ENST00000517879 253 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.03□□□□□ -2.24
LINC01560Q8TB33 UBL5P4-201ENST00000562584 236 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 MIR4742-201ENST00000581069 85 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 SNORD11B-201ENST00000607707 90 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 U4.5-201ENST00000617137 123 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 AC009248.2-201ENST00000619826 254 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 snoZ196.1-201ENST00000625269 89 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.03□□□□□ -2.24
LINC01560Q8TB33 MIR3662-201ENST00000637030 95 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 MTND4P12-201ENST00000498999 1377 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
LINC01560Q8TB33 MTND5P10-201ENST00000603719 1809 ntBASIC1.03□□□□□ -2.25
LINC01560Q8TB33 SNORD1A-201ENST00000364968 72 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 RNU6-17P-201ENST00000384245 107 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 RNU6-1215P-201ENST00000384441 102 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 RNU6-18P-201ENST00000384527 107 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 RNU1-78P-201ENST00000391248 165 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.02□□□□□ -2.25
LINC01560Q8TB33 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.02□□□□□ -2.25
LINC01560Q8TB33 AC074290.1-201ENST00000448883 135 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 MTND1P17-201ENST00000448961 204 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.02□□□□□ -2.25
LINC01560Q8TB33 RPS29P29-201ENST00000456396 171 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 RNU6-221P-201ENST00000459541 99 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 RNA5SP454-201ENST00000517231 127 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.02□□□□□ -2.25
LINC01560Q8TB33 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.02□□□□□ -2.25
LINC01560Q8TB33 AC068338.1-201ENST00000565567 176 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.02□□□□□ -2.25
LINC01560Q8TB33 FAM106DP-201ENST00000586416 501 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 AP003465.2-201ENST00000602571 373 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 MIR8063-201ENST00000621930 81 ntBASIC1.02□□□□□ -2.25
LINC01560Q8TB33 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
LINC01560Q8TB33 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.01□□□□□ -2.25
LINC01560Q8TB33 ICE2P2-201ENST00000483823 2787 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
LINC01560Q8TB33 Y_RNA.67-201ENST00000362870 100 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 RNU6-727P-201ENST00000363592 107 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 Y_RNA.157-201ENST00000363638 102 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 Y_RNA.301-201ENST00000364990 103 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 Y_RNA.415-201ENST00000384012 112 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 Y_RNA.453-201ENST00000384223 109 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 Y_RNA.573-201ENST00000384763 105 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 MIR194-1-201ENST00000384892 85 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 RNU6-159P-201ENST00000391080 106 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 RNA5SP118-201ENST00000410385 109 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 RNU6-955P-201ENST00000410497 104 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 AC009161.1-201ENST00000417306 376 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 AC069257.2-201ENST00000441819 155 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 AL606517.2-201ENST00000442855 241 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 snoU13.27-201ENST00000459278 104 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 RPS26P55-201ENST00000471178 356 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 AC091179.3-201ENST00000474761 144 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 AC092989.1-201ENST00000481235 277 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 RNU6-566P-201ENST00000516790 107 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 AL160236.1-201ENST00000556317 195 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 MIR4422-201ENST00000581938 83 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 U6.108-201ENST00000637764 58 ntBASIC1.01□□□□□ -2.25
LINC01560Q8TB33 SNORA72.2-201ENST00000365028 127 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 RNU6-596P-201ENST00000365395 98 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 RNU6-842P-201ENST00000384269 107 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 RNA5SP109-201ENST00000391010 116 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 MIR1253-201ENST00000408273 105 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 USP9YP30-201ENST00000430729 455 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1□□□□□ -2.25
LINC01560Q8TB33 FTH1P12-201ENST00000432137 551 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1□□□□□ -2.25
LINC01560Q8TB33 AP000870.1-201ENST00000472927 406 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 AL163195.1-201ENST00000496941 348 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 RNU4-49P-201ENST00000516080 140 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 RNU6-718P-201ENST00000516166 105 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 RNU6-1146P-201ENST00000516282 102 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 RNU6-1198P-201ENST00000516904 67 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 AL137100.2-201ENST00000555786 315 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 AC015688.6-201ENST00000577737 104 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 AP001485.1-201ENST00000604799 199 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 MIR7974-201ENST00000615835 79 ntBASIC1□□□□□ -2.25
LINC01560Q8TB33 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
LINC01560Q8TB33 Y_RNA.48-201ENST00000362710 103 ntBASIC0.99□□□□□ -2.25
LINC01560Q8TB33 RNU6-137P-201ENST00000363680 108 ntBASIC0.99□□□□□ -2.25
LINC01560Q8TB33 RNU6-595P-201ENST00000363944 107 ntBASIC0.99□□□□□ -2.25
LINC01560Q8TB33 RNU6-1240P-201ENST00000365155 104 ntBASIC0.99□□□□□ -2.25
LINC01560Q8TB33 Y_RNA.405-201ENST00000383979 100 ntBASIC0.99□□□□□ -2.25
LINC01560Q8TB33 Y_RNA.451-201ENST00000384200 100 ntBASIC0.99□□□□□ -2.25
LINC01560Q8TB33 Y_RNA.524-201ENST00000384564 100 ntBASIC0.99□□□□□ -2.25
LINC01560Q8TB33 Y_RNA.561-201ENST00000384694 100 ntBASIC0.99□□□□□ -2.25
LINC01560Q8TB33 RNU6-541P-201ENST00000384709 110 ntBASIC0.99□□□□□ -2.25
LINC01560Q8TB33 MIR10B-201ENST00000385011 110 ntBASIC0.99□□□□□ -2.25
LINC01560Q8TB33 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
LINC01560Q8TB33 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
LINC01560Q8TB33 MIR1185-2-201ENST00000408687 86 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms