Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNU4-80P-201ENST00000363200 141 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 Y_RNA.140-201ENST00000363474 103 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 Y_RNA.217-201ENST00000364214 105 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 Y_RNA.226-201ENST00000364337 114 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 RNU6-487P-201ENST00000365430 104 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 RNU6-748P-201ENST00000384648 107 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SYNE4Q8N205 ELOCP21-201ENST00000412558 336 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 AC012306.1-201ENST00000423267 114 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.99□□□□□ -1.93
SYNE4Q8N205 Y_RNA.641-201ENST00000459414 105 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 AC091179.3-201ENST00000474761 144 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.99□□□□□ -1.93
SYNE4Q8N205 AC072026.1-201ENST00000605023 201 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 AC091932.3-201ENST00000624223 323 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 AC110079.1-202ENST00000635213 138 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SYNE4Q8N205 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SYNE4Q8N205 BX322639.1-202ENST00000423987 2213 ntBASIC2.99□□□□□ -1.93
SYNE4Q8N205 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SYNE4Q8N205 Y_RNA.40-201ENST00000362645 93 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 RNU6-727P-201ENST00000363592 107 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 RNU6-137P-201ENST00000363680 108 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 Y_RNA.230-201ENST00000364348 109 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 RNU1-91P-201ENST00000364746 163 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 DYNLT3P1-201ENST00000378574 347 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 RNU5E-9P-201ENST00000411164 104 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 AC019205.3-201ENST00000424573 156 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 AC018634.1-201ENST00000437554 401 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 AC104389.3-201ENST00000445629 235 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 NDUFB4P10-201ENST00000452541 359 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 AC107626.1-201ENST00000471084 183 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.98□□□□□ -1.93
SYNE4Q8N205 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SYNE4Q8N205 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.98□□□□□ -1.93
SYNE4Q8N205 AC021231.3-201ENST00000558497 370 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.98□□□□□ -1.93
SYNE4Q8N205 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.98□□□□□ -1.93
SYNE4Q8N205 AC037487.3-201ENST00000606668 112 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 AL365265.1-201ENST00000621045 234 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 MTND5P35-201ENST00000557537 1720 ntBASIC2.98□□□□□ -1.93
SYNE4Q8N205 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SYNE4Q8N205 AC068700.1-201ENST00000565862 3754 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SYNE4Q8N205 RNU1-105P-201ENST00000363470 161 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 Y_RNA.240-201ENST00000364469 95 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 CD24P4-201ENST00000382840 243 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 Y_RNA.398-201ENST00000383952 99 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 RNU6-514P-201ENST00000384208 107 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 MIR548I2-201ENST00000408348 149 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 RNU6-1135P-201ENST00000411083 103 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 AC004866.1-201ENST00000411748 78 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 RAB28P5-201ENST00000427490 651 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 AC078809.1-201ENST00000427601 140 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 AC009969.1-201ENST00000438726 172 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 RNU6-625P-201ENST00000459412 107 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 AP001324.2-201ENST00000461163 319 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 AC091021.1-201ENST00000468051 388 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.97□□□□□ -1.93
SYNE4Q8N205 RNU7-200P-201ENST00000516105 62 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 RNA5SP76-201ENST00000516277 87 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 MRPS18CP4-201ENST00000535821 231 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 AC018448.1-201ENST00000552843 316 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.97□□□□□ -1.93
SYNE4Q8N205 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.97□□□□□ -1.93
SYNE4Q8N205 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 MIR1291-201ENST00000627649 87 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 AC132825.6-201ENST00000638861 357 ntBASIC2.97□□□□□ -1.93
SYNE4Q8N205 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
SYNE4Q8N205 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.97□□□□□ -1.93
SYNE4Q8N205 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SYNE4Q8N205 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SYNE4Q8N205 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SYNE4Q8N205 MAPK10-266ENST00000641066 6555 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 AC016717.2-201ENST00000609089 5141 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 AC092268.1-201ENST00000342691 405 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SYNE4Q8N205 SNORD113-1-201ENST00000365321 69 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 RNA5SP240-201ENST00000365355 128 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 Y_RNA.595-201ENST00000410403 105 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 Y_RNA.597-201ENST00000410463 100 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 RNU6-394P-201ENST00000410735 107 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 RPS26P42-201ENST00000413485 326 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.96□□□□□ -1.94
SYNE4Q8N205 RPS12P2-201ENST00000439728 269 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.96□□□□□ -1.94
SYNE4Q8N205 AC012308.1-201ENST00000451232 178 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.96□□□□□ -1.94
SYNE4Q8N205 RAC1P5-201ENST00000512182 576 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 AC074133.1-201ENST00000515696 183 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 Y_RNA.662-201ENST00000516028 97 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 RNU6-191P-201ENST00000516295 94 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.96□□□□□ -1.94
SYNE4Q8N205 AC233702.2-202ENST00000562547 291 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 MIR3144-201ENST00000579460 79 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 DEFB117-201ENST00000602356 141 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 AL138963.2-201ENST00000605137 226 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 AL008718.3-201ENST00000610217 321 ntBASIC2.96□□□□□ -1.94
SYNE4Q8N205 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms