Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.17□□□□□ -2.22
CCDC65Q8IXS2 Y_RNA.100-201ENST00000363141 102 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 RNY4P14-201ENST00000363656 96 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 Y_RNA.436-201ENST00000384097 102 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 MIR181A1-201ENST00000385026 110 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 MIR513A1-201ENST00000385138 129 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 COX6CP10-201ENST00000416832 224 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 AC005002.2-201ENST00000438228 269 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 NDUFB4P10-201ENST00000452541 359 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 AC091179.3-201ENST00000474761 144 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 RPS29P25-201ENST00000481709 171 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 RNA5SP454-201ENST00000517231 127 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 RAB11AP2-201ENST00000545905 639 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 UBL5P4-201ENST00000562584 236 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 AL929325.1-201ENST00000603096 117 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 AL359821.1-201ENST00000605519 182 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 AC124303.1-201ENST00000605703 360 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 SNORD114-21-201ENST00000606412 72 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 AC019193.3-201ENST00000609144 554 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 AC021506.2-201ENST00000612354 169 ntBASIC1.16□□□□□ -2.22
CCDC65Q8IXS2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
CCDC65Q8IXS2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
CCDC65Q8IXS2 SNORD33-201ENST00000362761 85 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 RNU6-53P-201ENST00000365367 106 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 Y_RNA.415-201ENST00000384012 112 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 MIR153-2-201ENST00000385225 87 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 MIR1253-201ENST00000408273 105 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 AC010154.1-201ENST00000425857 269 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 MTATP6P26-201ENST00000445926 662 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 AC074290.1-201ENST00000448883 135 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 RNU6-864P-201ENST00000516256 108 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 AL512310.8-201ENST00000550183 120 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 CYP3A52P-201ENST00000563326 91 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 AC015540.1-201ENST00000615828 501 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 AC009033.1-201ENST00000624279 431 ntBASIC1.15□□□□□ -2.23
CCDC65Q8IXS2 U3.8-201ENST00000363675 217 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 RNU6-596P-201ENST00000365395 98 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 Y_RNA.402-201ENST00000383972 102 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 RNU6-306P-201ENST00000384617 107 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 AL356776.1-201ENST00000406574 447 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 AC008134.1-201ENST00000420943 193 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 AL603825.1-201ENST00000438481 80 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 MTATP6P13-201ENST00000438531 667 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 DYNLT3P2-201ENST00000442517 295 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 RNU6-1198P-201ENST00000516904 67 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 EIF1P4-201ENST00000572664 335 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 MIR4498-201ENST00000577599 66 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 MIR3937-201ENST00000580135 106 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 U6.73-201ENST00000619194 103 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 AC091895.1-201ENST00000624494 256 ntBASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC65Q8IXS2 RNU6-727P-201ENST00000363592 107 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 RNU6-831P-201ENST00000384548 107 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 Y_RNA.533-201ENST00000384596 114 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 RNU6-1031P-201ENST00000384773 107 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 MIR10B-201ENST00000385011 110 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 RPL23AP36-201ENST00000413895 458 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 RPL30P16-201ENST00000419341 429 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 AL589823.1-201ENST00000429577 183 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 AC103851.1-201ENST00000506833 274 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 ACA59.1-201ENST00000515966 143 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 RNU6-1314P-201ENST00000517139 104 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 MZT1P2-201ENST00000604387 248 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 AL359075.3-201ENST00000613288 217 ntBASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC65Q8IXS2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 RNA5SP327-201ENST00000362494 101 ntBASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 Y_RNA.89-201ENST00000363031 102 ntBASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 RNU6-1059P-201ENST00000363752 98 ntBASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 RNU6-392P-201ENST00000364926 101 ntBASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 RNA5SP323-201ENST00000391094 133 ntBASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 AP000870.1-201ENST00000472927 406 ntBASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 RNU1-142P-201ENST00000516682 145 ntBASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 AC080078.3-201ENST00000605407 463 ntBASIC1.12□□□□□ -2.23
CCDC65Q8IXS2 MIR8054-201ENST00000620877 86 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms