Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 Y_RNA.552-201ENST00000384665 112 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 MIR548B-201ENST00000385247 97 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 RN7SKP223-201ENST00000410582 62 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 RNU6-847P-201ENST00000411115 108 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 RNU2-32P-201ENST00000411193 191 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 RNU6-1199P-201ENST00000411249 104 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 AL161788.1-201ENST00000441805 169 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 AL139109.1-201ENST00000455491 297 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 AC080013.2-201ENST00000460866 323 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 AC006483.1-201ENST00000487308 313 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 ATP5EP1-201ENST00000510257 156 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 RNA5SP385-201ENST00000515947 110 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 MIR3145-201ENST00000580727 82 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 MIR3117-201ENST00000584034 78 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 AC037487.3-201ENST00000606668 112 ntBASIC2.49□□□□□ -2.01
SFTPA1Q8IWL2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 Y_RNA.418-201ENST00000384029 102 ntBASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 Y_RNA.478-201ENST00000384358 107 ntBASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 Y_RNA.539-201ENST00000384635 107 ntBASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 MIR592-201ENST00000384959 97 ntBASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 RNA5SP281-201ENST00000516504 135 ntBASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 RPL21P9-201ENST00000556149 474 ntBASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 AC090616.3-201ENST00000582184 217 ntBASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 AL442067.1-201ENST00000613261 223 ntBASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 AL590240.4-201ENST00000616908 390 ntBASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 MIR1248-201ENST00000629190 106 ntBASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SFTPA1Q8IWL2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 SNORA25.1-201ENST00000362326 128 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 Y_RNA.20-201ENST00000362479 113 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 RNU6-326P-201ENST00000365480 107 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 RNU6-338P-201ENST00000383888 105 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 RNU6-546P-201ENST00000383991 107 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 RNU2-54P-201ENST00000410299 190 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 RN7SKP123-201ENST00000410732 291 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 CYP2C59P-201ENST00000457790 269 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 HMGN2P9-201ENST00000476875 229 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 AC021269.2-201ENST00000532318 330 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 AC006380.1-201ENST00000603598 186 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 AL356280.1-201ENST00000603614 379 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 U2.14-201ENST00000615943 113 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 AC008873.1-201ENST00000625051 138 ntBASIC2.47□□□□□ -2.01
SFTPA1Q8IWL2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 MIR410-201ENST00000362222 80 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 U3.8-201ENST00000363675 217 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-324P-201ENST00000363957 106 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-514P-201ENST00000384208 107 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 MIR586-201ENST00000385035 97 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 MIR1283-1-201ENST00000408494 87 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 RNA5SP344-201ENST00000411081 104 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 MTCO1P5-201ENST00000433573 344 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 snoU13.26-201ENST00000459452 105 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 RN7SL297P-201ENST00000483161 293 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 AC026436.1-201ENST00000510537 270 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 RNU2-12P-201ENST00000517216 168 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 AC018630.3-201ENST00000542637 96 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 MIR4643-201ENST00000577473 78 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 MIR4753-201ENST00000585119 83 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 AL355297.2-201ENST00000604792 129 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 AC103810.6-201ENST00000606708 136 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 AC007336.1-201ENST00000576365 3828 ntBASIC2.46□□□□□ -2.02
SFTPA1Q8IWL2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 Y_RNA.44-201ENST00000362676 108 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 RNA5SP456-201ENST00000364002 114 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 RNA5SP125-201ENST00000364843 120 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 SNORD14D-201ENST00000384390 87 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 RNU2-63P-201ENST00000410792 194 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 TOMM22P2-201ENST00000430735 237 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 Z98949.2-201ENST00000440996 144 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 snoU13.15-201ENST00000459407 104 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 AC091959.1-201ENST00000495857 238 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms