Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 Y_RNA.599-201ENST00000410489 109 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 HSPE1P24-201ENST00000450782 238 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 NDUFB4P10-201ENST00000452541 359 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.77□□□□□ -2.13
PRPF39Q86UA1 RPL7P42-201ENST00000481005 679 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 RNU6-307P-201ENST00000516743 106 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 AC093023.1-201ENST00000547375 507 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.77□□□□□ -2.13
PRPF39Q86UA1 MZT1P2-201ENST00000604387 248 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 uc_338.5-201ENST00000611839 155 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.77□□□□□ -2.13
PRPF39Q86UA1 AC099654.5-201ENST00000636479 350 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 MTND5P35-201ENST00000557537 1720 ntBASIC1.77□□□□□ -2.13
PRPF39Q86UA1 SNORA33-201ENST00000363664 130 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 Y_RNA.184-201ENST00000363884 108 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 SNORA63D-201ENST00000364359 132 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 RNA5SP467-201ENST00000391274 118 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 MIR1185-2-201ENST00000408687 86 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 AC016909.1-201ENST00000415916 166 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 MTCYBP10-201ENST00000424905 650 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 MTND1P2-201ENST00000430604 821 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.76□□□□□ -2.13
PRPF39Q86UA1 MTND3P10-201ENST00000450967 341 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 SNORD13-201ENST00000459299 104 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 RNU1-142P-201ENST00000516682 145 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 MIR3618-201ENST00000580330 88 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.76□□□□□ -2.13
PRPF39Q86UA1 MIR8063-201ENST00000621930 81 ntBASIC1.76□□□□□ -2.13
PRPF39Q86UA1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PRPF39Q86UA1 Y_RNA.88-201ENST00000363029 99 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 RNA5SP363-201ENST00000365072 115 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.75□□□□□ -2.13
PRPF39Q86UA1 RNU1-139P-201ENST00000391307 165 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.75□□□□□ -2.13
PRPF39Q86UA1 AC108667.1-201ENST00000428618 249 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 JTBP1-201ENST00000441314 247 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.75□□□□□ -2.13
PRPF39Q86UA1 snoU13.27-201ENST00000459278 104 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 RPL26P26-201ENST00000480251 434 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 AC024995.1-201ENST00000523014 93 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.75□□□□□ -2.13
PRPF39Q86UA1 APOOP3-201ENST00000536787 586 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 AC090617.3-201ENST00000573670 475 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 AC005899.2-201ENST00000584353 90 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 AC016727.1-205ENST00000605437 569 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 AC005014.2-201ENST00000607795 599 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 AC122108.2-201ENST00000611946 526 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 AL359075.3-201ENST00000613288 217 ntBASIC1.75□□□□□ -2.13
PRPF39Q86UA1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
PRPF39Q86UA1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRPF39Q86UA1 RNU6-845P-201ENST00000362578 103 ntBASIC1.74□□□□□ -2.13
PRPF39Q86UA1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.74□□□□□ -2.13
PRPF39Q86UA1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.74□□□□□ -2.13
PRPF39Q86UA1 RNU6-331P-201ENST00000384724 107 ntBASIC1.74□□□□□ -2.13
PRPF39Q86UA1 AC092423.1-201ENST00000430165 186 ntBASIC1.74□□□□□ -2.13
PRPF39Q86UA1 RNU7-34P-201ENST00000459394 64 ntBASIC1.74□□□□□ -2.13
PRPF39Q86UA1 RPL31P58-201ENST00000469001 379 ntBASIC1.74□□□□□ -2.13
PRPF39Q86UA1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.74□□□□□ -2.13
PRPF39Q86UA1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.74□□□□□ -2.13
PRPF39Q86UA1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
PRPF39Q86UA1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRPF39Q86UA1 ICE2P2-201ENST00000483823 2787 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 Y_RNA.339-201ENST00000365325 102 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 RNU6-338P-201ENST00000383888 105 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 RNU6-281P-201ENST00000384212 103 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 MT-TL1-201ENST00000386347 75 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 SNORA67.5-201ENST00000391036 107 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 Y_RNA.595-201ENST00000410403 105 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 UBE2V1P7-201ENST00000446395 340 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 MTND4P18-201ENST00000447010 465 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 HMGN1P12-201ENST00000499125 195 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 CBX3P4-201ENST00000538909 354 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 AL137100.2-201ENST00000555786 315 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 MIR4709-201ENST00000577272 72 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.73□□□□□ -2.13
PRPF39Q86UA1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.73□□□□□ -2.13
PRPF39Q86UA1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PRPF39Q86UA1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PRPF39Q86UA1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PRPF39Q86UA1 RNU6-879P-201ENST00000364328 108 ntBASIC1.72□□□□□ -2.13
PRPF39Q86UA1 RNU4-42P-201ENST00000364738 142 ntBASIC1.72□□□□□ -2.13
PRPF39Q86UA1 SNORA75.4-201ENST00000391278 119 ntBASIC1.72□□□□□ -2.13
PRPF39Q86UA1 RNU6-1001P-201ENST00000411265 100 ntBASIC1.72□□□□□ -2.13
PRPF39Q86UA1 UQCRBP2-201ENST00000447827 297 ntBASIC1.72□□□□□ -2.13
PRPF39Q86UA1 Y_RNA.635-201ENST00000459041 101 ntBASIC1.72□□□□□ -2.13
PRPF39Q86UA1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.72□□□□□ -2.13
PRPF39Q86UA1 AL163195.1-201ENST00000496941 348 ntBASIC1.72□□□□□ -2.13
PRPF39Q86UA1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.72□□□□□ -2.13
PRPF39Q86UA1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.72□□□□□ -2.13
PRPF39Q86UA1 AK6P2-201ENST00000549020 471 ntBASIC1.72□□□□□ -2.13
PRPF39Q86UA1 MIR5701-3-201ENST00000578890 82 ntBASIC1.72□□□□□ -2.13
PRPF39Q86UA1 MIR5701-1-201ENST00000585138 82 ntBASIC1.72□□□□□ -2.13
PRPF39Q86UA1 MIR5701-2-201ENST00000615634 82 ntBASIC1.72□□□□□ -2.13
PRPF39Q86UA1 RNU6-457P-201ENST00000363999 107 ntBASIC1.71□□□□□ -2.14
PRPF39Q86UA1 Y_RNA.279-201ENST00000364763 95 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms