Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNU4-79P-201ENST00000362764 141 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 RNU6-862P-201ENST00000362804 105 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 Y_RNA.592-201ENST00000410274 109 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 AC022028.1-201ENST00000412054 408 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 MTND4P28-201ENST00000426217 387 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 UQCRBP2-201ENST00000447827 297 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 snoU13.26-201ENST00000459452 105 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 RNA5SP57-201ENST00000459463 123 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.86□□□□□ -2.11
LDB1Q86U70 AC025647.1-201ENST00000517879 253 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 SUB1P4-201ENST00000566062 339 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
LDB1Q86U70 AL117336.2-201ENST00000602435 335 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.86□□□□□ -2.11
LDB1Q86U70 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.86□□□□□ -2.11
LDB1Q86U70 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
LDB1Q86U70 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LDB1Q86U70 RNA5SP361-201ENST00000362686 118 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 RNU6-1301P-201ENST00000362724 104 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 RNU5E-4P-201ENST00000364931 120 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 Y_RNA.314-201ENST00000365114 102 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 AL117342.1-201ENST00000404861 406 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 MIR1253-201ENST00000408273 105 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 AF228730.4-201ENST00000421457 183 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 AL445685.2-201ENST00000422551 342 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 MRPS18CP6-201ENST00000423587 223 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 AC099677.2-201ENST00000436385 175 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.85□□□□□ -2.11
LDB1Q86U70 PCNPP5-201ENST00000452246 481 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 UBL5P3-201ENST00000475112 231 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 AC074133.1-201ENST00000515696 183 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 RNU6-107P-201ENST00000516643 102 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 RNU6-699P-201ENST00000517081 110 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.85□□□□□ -2.11
LDB1Q86U70 AC110588.1-201ENST00000559699 137 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 MIR5094-201ENST00000578766 85 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
LDB1Q86U70 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 MIR338-201ENST00000636369 67 ntBASIC1.85□□□□□ -2.11
LDB1Q86U70 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
LDB1Q86U70 snoU2-30.2-201ENST00000362805 70 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 RNU1-96P-201ENST00000364163 162 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 RNU6-1240P-201ENST00000365155 104 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 RNU6-318P-201ENST00000384283 103 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 Y_RNA.605-201ENST00000410577 105 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 RNA5SP100-201ENST00000410903 110 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 RNA5SP59-201ENST00000410922 110 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 AC009310.1-201ENST00000414414 451 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 CST2P1-201ENST00000425770 87 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.84□□□□□ -2.11
LDB1Q86U70 RPS29P11-201ENST00000496507 171 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 MRPS17P9-201ENST00000511924 393 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.84□□□□□ -2.11
LDB1Q86U70 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.84□□□□□ -2.11
LDB1Q86U70 AC069114.2-201ENST00000604699 304 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.84□□□□□ -2.11
LDB1Q86U70 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.84□□□□□ -2.11
LDB1Q86U70 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.84□□□□□ -2.11
LDB1Q86U70 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.84□□□□□ -2.12
LDB1Q86U70 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.12
LDB1Q86U70 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
LDB1Q86U70 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
LDB1Q86U70 Y_RNA.428-201ENST00000384078 102 ntBASIC1.83□□□□□ -2.12
LDB1Q86U70 Y_RNA.463-201ENST00000384271 102 ntBASIC1.83□□□□□ -2.12
LDB1Q86U70 AC016909.1-201ENST00000415916 166 ntBASIC1.83□□□□□ -2.12
LDB1Q86U70 TOMM22P2-201ENST00000430735 237 ntBASIC1.83□□□□□ -2.12
LDB1Q86U70 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.83□□□□□ -2.12
LDB1Q86U70 AC007677.1-201ENST00000445757 515 ntBASIC1.83□□□□□ -2.12
LDB1Q86U70 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.83□□□□□ -2.12
LDB1Q86U70 RNU7-169P-201ENST00000459456 61 ntBASIC1.83□□□□□ -2.12
LDB1Q86U70 AC010900.2-201ENST00000604508 210 ntBASIC1.83□□□□□ -2.12
LDB1Q86U70 AL357075.2-201ENST00000614906 189 ntBASIC1.83□□□□□ -2.12
LDB1Q86U70 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
LDB1Q86U70 RNU6-1266P-201ENST00000362794 105 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 RNU6-1264P-201ENST00000383891 107 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 AC019129.1-201ENST00000403786 261 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 SNORD12B-201ENST00000410433 91 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 ELOCP21-201ENST00000412558 336 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.82□□□□□ -2.12
LDB1Q86U70 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.82□□□□□ -2.12
LDB1Q86U70 HMGN2P34-201ENST00000437647 269 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.82□□□□□ -2.12
LDB1Q86U70 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 RNU6-911P-201ENST00000516523 104 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 SNORD116.3-201ENST00000517176 78 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 AC022254.1-201ENST00000567857 235 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 MIR4713-201ENST00000582691 75 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 AL096840.1-201ENST00000603287 93 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 AC091932.3-201ENST00000624223 323 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LDB1Q86U70 ZNF355P-201ENST00000427301 3216 ntBASIC1.82□□□□□ -2.12
LDB1Q86U70 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms