Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC137590.2-201ENST00000619709 240 ntBASIC1.87□□□□□ -2.11
NPHP3Q7Z494 AL669831.3-213ENST00000636676 183 ntBASIC1.87□□□□□ -2.11
NPHP3Q7Z494 AC245060.5-201ENST00000610778 3293 ntBASIC1.87□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.70-201ENST00000362886 110 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 SNORD115-32-201ENST00000364079 82 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 SNORD114-6-201ENST00000364393 72 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.332-201ENST00000365271 113 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 RNU6-438P-201ENST00000365561 103 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 RNU6-17P-201ENST00000384245 107 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 RNU6-18P-201ENST00000384527 107 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.86□□□□□ -2.11
NPHP3Q7Z494 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.86□□□□□ -2.11
NPHP3Q7Z494 RNU7-175P-201ENST00000515915 61 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 RNU6-559P-201ENST00000516151 98 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.702-201ENST00000516843 96 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 RNU6-58P-201ENST00000517143 103 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 AC027288.2-201ENST00000553028 243 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 UBL5P4-201ENST00000562584 236 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 FRG2DP-202ENST00000566967 323 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.86□□□□□ -2.11
NPHP3Q7Z494 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.86□□□□□ -2.11
NPHP3Q7Z494 AC113139.1-201ENST00000605049 239 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.86□□□□□ -2.11
NPHP3Q7Z494 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.86□□□□□ -2.11
NPHP3Q7Z494 MTND4LP32-201ENST00000636111 270 ntBASIC1.86□□□□□ -2.11
NPHP3Q7Z494 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.86□□□□□ -2.11
NPHP3Q7Z494 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
NPHP3Q7Z494 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
NPHP3Q7Z494 AP000648.3-201ENST00000623539 4507 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 MIR340-201ENST00000362125 95 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 RNU6-1188P-201ENST00000363795 107 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.319-201ENST00000365138 92 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.529-201ENST00000384586 119 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 MIR520E-201ENST00000384867 87 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 MIR153-2-201ENST00000385225 87 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 SNORA40.6-201ENST00000391153 128 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.646-201ENST00000410980 101 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 RPS20P15-201ENST00000412792 311 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 USMG5P1-201ENST00000425964 177 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.85□□□□□ -2.11
NPHP3Q7Z494 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.85□□□□□ -2.11
NPHP3Q7Z494 COX6CP14-201ENST00000469580 174 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.85□□□□□ -2.11
NPHP3Q7Z494 MIR5701-3-201ENST00000578890 82 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 MIR5701-1-201ENST00000585138 82 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 TCL6_2.1-201ENST00000615162 119 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 MIR5701-2-201ENST00000615634 82 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 AL590240.4-201ENST00000616908 390 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 MIR1302-1-201ENST00000637932 143 ntBASIC1.85□□□□□ -2.11
NPHP3Q7Z494 BX322639.1-202ENST00000423987 2213 ntBASIC1.84□□□□□ -2.11
NPHP3Q7Z494 RNU6-222P-201ENST00000362438 107 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 RNY1P16-201ENST00000363063 111 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.356-201ENST00000365475 113 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 RNU6-1026P-201ENST00000384465 108 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 RNU6-310P-201ENST00000384655 107 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 RNU6-541P-201ENST00000384709 110 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 MIR320A-201ENST00000385302 82 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 AC123900.1-201ENST00000420390 96 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 NCOR1P3-201ENST00000420479 303 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 MTND4LP11-201ENST00000422184 280 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.84□□□□□ -2.12
NPHP3Q7Z494 RPL23AP50-201ENST00000434149 455 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.84□□□□□ -2.12
NPHP3Q7Z494 AC093019.1-201ENST00000443135 252 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 MTCO3P10-201ENST00000455912 772 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.84□□□□□ -2.12
NPHP3Q7Z494 AP000870.1-201ENST00000472927 406 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.84□□□□□ -2.12
NPHP3Q7Z494 RNU6-1223P-201ENST00000517124 104 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.84□□□□□ -2.12
NPHP3Q7Z494 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 MIR151B-201ENST00000584249 96 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 7SK.7-201ENST00000603504 247 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.84□□□□□ -2.12
NPHP3Q7Z494 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.84□□□□□ -2.12
NPHP3Q7Z494 AC112487.2-201ENST00000637950 304 ntBASIC1.84□□□□□ -2.12
NPHP3Q7Z494 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
NPHP3Q7Z494 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NPHP3Q7Z494 RNU6-874P-201ENST00000362390 105 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 RNA5SP493-201ENST00000364115 91 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 SNORD31B-201ENST00000364977 69 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 RNU6-1009P-201ENST00000390996 107 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 AC139712.2-201ENST00000424302 339 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 MTND3P23-201ENST00000431980 347 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.83□□□□□ -2.12
NPHP3Q7Z494 RPS29P1-201ENST00000465274 159 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 AC026470.2-201ENST00000561492 181 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 AL355375.2-201ENST00000574825 175 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 FAM106DP-201ENST00000586416 501 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 SNRPGP20-201ENST00000604477 205 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.804-201ENST00000615262 101 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.83□□□□□ -2.12
NPHP3Q7Z494 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.82□□□□□ -2.12
NPHP3Q7Z494 Y_RNA.106-201ENST00000363189 100 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 RNU6-873P-201ENST00000363833 107 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 SNORD115-8-201ENST00000363856 82 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 SNORD115-38-201ENST00000365037 82 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 RNU6-418P-201ENST00000384035 107 ntBASIC1.82□□□□□ -2.12
NPHP3Q7Z494 SNORD116-29-201ENST00000384516 83 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms