Protein–RNA interactions for Protein: Q3L8U1

CHD9, Chromodomain-helicase-DNA-binding protein 9, humanhuman

Predictions only

Length 2,897 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9Q3L8U1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 AC100830.2-201ENST00000581636 240 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 AC091965.4-201ENST00000607691 587 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 MTND5P16-201ENST00000460269 1703 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 C1DP2-201ENST00000418167 426 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 HSFY5P-201ENST00000453726 309 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 C1DP4-201ENST00000455429 424 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 AC074133.1-201ENST00000515696 183 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 ELOCP32-201ENST00000548625 324 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 AC112187.2-201ENST00000604345 283 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 MIR377-201ENST00000362145 69 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 SNORA33-201ENST00000363664 130 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 RNU6-960P-201ENST00000364056 120 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 MIR496-201ENST00000385226 102 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 MIR760-201ENST00000390220 80 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 MIR300-201ENST00000401138 83 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 RNU6-177P-201ENST00000411257 104 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 AC092574.1-201ENST00000609771 420 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 AC024940.5-201ENST00000622889 474 ntBASIC-0.2□□□□□ -2.44
CHD9Q3L8U1 RNU6-417P-201ENST00000384712 107 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 MIR520C-201ENST00000385005 87 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 U8.16-201ENST00000391279 133 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 RNU4-46P-201ENST00000410818 138 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 RPL23AP30-201ENST00000432419 501 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 AC138749.5-201ENST00000611461 208 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 RNU4-15P-201ENST00000362613 141 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 RNU6-975P-201ENST00000384296 105 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 MIR644A-201ENST00000385262 94 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 AC117522.1-201ENST00000509821 380 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 AC079395.1-201ENST00000510981 262 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 RNU6-856P-201ENST00000516959 98 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 DEFB130C-202ENST00000530001 230 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 MTND3P13-201ENST00000574391 343 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 AC011195.1-201ENST00000578177 177 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 AC103706.2-201ENST00000638080 240 ntBASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
CHD9Q3L8U1 RNU6-376P-201ENST00000384731 106 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 MIR558-201ENST00000384920 94 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 MTND4P3-201ENST00000417829 541 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 AL353777.1-201ENST00000425552 326 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 SNAP23P1-201ENST00000433229 246 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 SEPT14P24-201ENST00000447236 180 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 RNU7-56P-201ENST00000458744 62 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 AC007215.1-201ENST00000464893 276 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 MIR548AC-201ENST00000585049 88 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 U6.42-201ENST00000618440 107 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 RNU6-396P-201ENST00000365369 105 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 RNU6-61P-201ENST00000365528 109 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 RNU6-815P-201ENST00000384080 113 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 RNU6-925P-201ENST00000384629 104 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 RPL17P35-201ENST00000432217 549 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 AC016632.1-201ENST00000503994 196 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 RPL39P5-202ENST00000512505 151 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 RNU6-448P-201ENST00000517052 107 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 SNORA74.3-201ENST00000517108 154 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 RPL21P9-201ENST00000556149 474 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 AC090517.1-201ENST00000569307 266 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 MIR4778-201ENST00000577635 80 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 AC022960.3-201ENST00000619794 441 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 AL450472.1-202ENST00000637286 180 ntBASIC-0.22□□□□□ -2.44
CHD9Q3L8U1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 SNORA72.1-201ENST00000363485 129 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 SNORD32A-201ENST00000364805 84 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 RNU6-883P-201ENST00000384597 107 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 MIR526A1-201ENST00000384897 85 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 MTCYBP2-201ENST00000407745 171 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 SNORD111-201ENST00000408139 94 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 RNA5SP95-201ENST00000410319 137 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 RNU6-735P-201ENST00000410612 107 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 AC079354.2-201ENST00000453523 154 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 TPT1P7-201ENST00000458300 517 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 MTND3P25-201ENST00000509243 135 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 RNU6-344P-201ENST00000516635 111 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 RNA5SP94-201ENST00000516917 108 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 AC023442.1-201ENST00000531247 422 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 AP002004.2-201ENST00000531656 154 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 MIR4300-201ENST00000581016 96 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 657.6 ms