Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU1-96P-201ENST00000364163 162 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.248-201ENST00000364501 109 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-975P-201ENST00000384296 105 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 MIR153-2-201ENST00000385225 87 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-876P-201ENST00000391295 104 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 MIR320B2-201ENST00000408479 138 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 AC243428.1-201ENST00000421099 264 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 RNU7-57P-201ENST00000459540 60 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 AC011406.1-201ENST00000512440 370 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 MIR3660-201ENST00000584845 100 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 AC092794.1-201ENST00000612734 582 ntBASIC1.56□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-222P-201ENST00000362438 107 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 RNU1-22P-201ENST00000363334 158 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-112P-201ENST00000363599 104 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 SNORA33-201ENST00000363664 130 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 CST2P1-201ENST00000425770 87 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 RNU1-98P-201ENST00000458992 160 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 AP000870.1-201ENST00000472927 406 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 RPL7P42-201ENST00000481005 679 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 AC067942.3-201ENST00000512025 362 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 RNA5SP445-201ENST00000515889 115 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.670-201ENST00000516255 105 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-948P-201ENST00000516374 107 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 RNU7-30P-201ENST00000516835 62 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-856P-201ENST00000516959 98 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 7SK.7-201ENST00000603504 247 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 AL355802.3-201ENST00000607571 545 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 AL078596.1-201ENST00000624856 447 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 AC068205.3-201ENST00000636385 468 ntBASIC1.55□□□□□ -2.16
SHROOM1Q2M3G4 SNORD114-27-201ENST00000363766 70 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 SNORA67.2-201ENST00000384300 149 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.505-201ENST00000384489 102 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 MIR548K-201ENST00000408406 116 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 MIR1267-201ENST00000408723 78 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.594-201ENST00000410373 140 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 RNA5SP504-201ENST00000410676 117 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 AL353997.1-201ENST00000432936 108 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 MTND4P17-201ENST00000470444 350 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 AC026782.1-201ENST00000512952 449 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 RNU7-175P-201ENST00000515915 61 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 RNA5SP54-201ENST00000516951 92 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 AL590705.4-201ENST00000532209 134 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 MIR5695-201ENST00000579717 85 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 AC018462.2-201ENST00000605375 395 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 MIR6504-201ENST00000613520 61 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 MTND4P12-201ENST00000498999 1377 ntBASIC1.54□□□□□ -2.16
SHROOM1Q2M3G4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.184-201ENST00000363884 108 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 SNORD115-32-201ENST00000364079 82 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 Y_RNA.415-201ENST00000384012 112 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-17P-201ENST00000384245 107 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-18P-201ENST00000384527 107 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-417P-201ENST00000384712 107 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-331P-201ENST00000384724 107 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 MIR150-201ENST00000385048 84 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 MIR548B-201ENST00000385247 97 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 SNORA40.6-201ENST00000391153 128 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 ZNF299P-201ENST00000406845 1804 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-1050P-201ENST00000410388 107 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 RNU2-7P-201ENST00000410794 178 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-1304P-201ENST00000411374 106 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 AC074085.1-201ENST00000413598 418 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 HMGN2P34-201ENST00000437647 269 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 SNORD5.1-201ENST00000458800 75 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 AC103851.1-201ENST00000506833 274 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 AC068338.1-201ENST00000565567 176 ntBASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.53□□□□□ -2.16
SHROOM1Q2M3G4 RNU6-595P-201ENST00000363944 107 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 SNORD114-22-201ENST00000365423 72 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 RNU6-601P-201ENST00000384540 107 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 RNU6-296P-201ENST00000384608 107 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 MIR586-201ENST00000385035 97 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 AL117342.1-201ENST00000404861 406 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 MTND1P2-201ENST00000430604 821 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 MTND3P23-201ENST00000431980 347 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 AC245047.4-201ENST00000433189 144 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 MTND3P10-201ENST00000450967 341 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 AC107399.1-201ENST00000451226 265 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 RNU7-87P-201ENST00000459343 62 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 AC005908.1-201ENST00000468701 347 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 AC114982.1-201ENST00000469402 321 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 AC091179.3-201ENST00000474761 144 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 RNU6-1213P-201ENST00000517075 94 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 RNA5SP437-201ENST00000517249 129 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 AC005668.1-201ENST00000571142 476 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 MZT1P2-201ENST00000604387 248 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 SNORD11B-201ENST00000607707 90 ntBASIC1.52□□□□□ -2.17
SHROOM1Q2M3G4 AC009229.3-201ENST00000608056 282 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms