Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AC008163.1-202ENST00000636004 2889 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
SSX1Q16384 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.63□□□□□ -2.31
SSX1Q16384 RNU6-1266P-201ENST00000362794 105 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 Y_RNA.100-201ENST00000363141 102 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 RNU6-873P-201ENST00000363833 107 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 RNU6-1322P-201ENST00000364309 107 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 RNU6-53P-201ENST00000365367 106 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 Y_RNA.415-201ENST00000384012 112 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 Y_RNA.582-201ENST00000391023 95 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 AL355796.1-201ENST00000406706 323 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 RNU6-648P-201ENST00000410190 107 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 STAG3L5P-204ENST00000443759 179 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 TPT1P7-201ENST00000458300 517 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 RPS26P48-201ENST00000491713 339 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 PDCD5P2-201ENST00000507570 312 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.63□□□□□ -2.31
SSX1Q16384 RNU6-917P-201ENST00000516294 104 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 RNU6-835P-201ENST00000516974 104 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.63□□□□□ -2.31
SSX1Q16384 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.63□□□□□ -2.31
SSX1Q16384 AC027288.2-201ENST00000553028 243 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 AL121579.1-201ENST00000555129 305 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.63□□□□□ -2.31
SSX1Q16384 MIR4653-201ENST00000585107 83 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.63□□□□□ -2.31
SSX1Q16384 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
SSX1Q16384 RNU6-727P-201ENST00000363592 107 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 RNU6-522P-201ENST00000364497 107 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 Y_RNA.319-201ENST00000365138 92 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 RNU6-969P-201ENST00000383900 105 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 Y_RNA.409-201ENST00000383990 98 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 MIR200A-201ENST00000384875 90 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 CALM2P3-201ENST00000400429 449 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 Z82205.1-201ENST00000428456 297 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.62□□□□□ -2.31
SSX1Q16384 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.62□□□□□ -2.31
SSX1Q16384 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.62□□□□□ -2.31
SSX1Q16384 SNORD65B-201ENST00000459126 73 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 AC083904.1-201ENST00000487828 231 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 PSMC1P5-201ENST00000512850 177 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 RNU6-947P-201ENST00000516264 106 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 RNU6-197P-201ENST00000516680 100 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 MIR4498-201ENST00000577599 66 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 AC119751.7-201ENST00000600494 245 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 SNORA28-201ENST00000606769 126 ntBASIC0.62□□□□□ -2.31
SSX1Q16384 RNU6-254P-201ENST00000363377 107 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 Y_RNA.151-201ENST00000363566 112 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 RNU6-137P-201ENST00000363680 108 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 SNORA80D-201ENST00000384488 135 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 MIR608-201ENST00000384820 100 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 MIR153-2-201ENST00000385225 87 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 AL451046.2-201ENST00000403074 277 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 RNU2-64P-201ENST00000411315 191 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 CALM2P4-201ENST00000430810 426 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 AL445305.1-201ENST00000432577 575 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 MTCO1P19-201ENST00000443487 500 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 AC091179.3-201ENST00000474761 144 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 MTCO2P30-201ENST00000503662 364 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.61□□□□□ -2.31
SSX1Q16384 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.61□□□□□ -2.31
SSX1Q16384 MIR4438-201ENST00000585271 93 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 MIR6715A-201ENST00000615929 79 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 AC097520.1-201ENST00000624435 385 ntBASIC0.61□□□□□ -2.31
SSX1Q16384 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.61□□□□□ -2.31
SSX1Q16384 RNU6-128P-201ENST00000383976 107 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 RNU6-424P-201ENST00000384367 105 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 Y_RNA.481-201ENST00000384373 102 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 RNU6-790P-201ENST00000384479 105 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 Y_RNA.553-201ENST00000384670 102 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 U8.16-201ENST00000391279 133 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.6□□□□□ -2.31
SSX1Q16384 MTND4P18-201ENST00000447010 465 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 MRPS10P1-201ENST00000448483 130 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 AC117454.1-201ENST00000491120 168 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.6□□□□□ -2.31
SSX1Q16384 AC090142.3-201ENST00000519012 385 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 AC023157.2-201ENST00000540596 141 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.6□□□□□ -2.31
SSX1Q16384 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.6□□□□□ -2.31
SSX1Q16384 RNU6-89P-201ENST00000606519 100 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 AC009248.2-201ENST00000619826 254 ntBASIC0.6□□□□□ -2.31
SSX1Q16384 HSBP1P2-201ENST00000299671 229 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 Y_RNA.231-201ENST00000364358 102 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 SNORA2.2-201ENST00000365473 135 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 Y_RNA.359-201ENST00000365498 102 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 RNU6-793P-201ENST00000384233 104 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 RNU6-159P-201ENST00000391080 106 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 MTCO3P18-201ENST00000440206 761 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 PCMTD1P1-201ENST00000455560 355 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.59□□□□□ -2.31
SSX1Q16384 OR9P1P-201ENST00000496431 281 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.59□□□□□ -2.31
SSX1Q16384 RNU6-322P-201ENST00000516010 103 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 AC136628.3-201ENST00000521868 290 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.59□□□□□ -2.31
SSX1Q16384 APOOP3-201ENST00000536787 586 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 UBL5P4-201ENST00000562584 236 ntBASIC0.59□□□□□ -2.31
SSX1Q16384 AL357312.1-201ENST00000603879 298 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms