Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 uc_338.34-201ENST00000617467 174 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 SCARNA4-201ENST00000629045 128 ntBASIC-0.01□□□□□ -2.41
H3F3AP84243 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
H3F3AP84243 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.02□□□□□ -2.41
H3F3AP84243 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.02□□□□□ -2.41
H3F3AP84243 AL355143.1-201ENST00000407101 841 ntBASIC-0.02□□□□□ -2.41
H3F3AP84243 AL358176.2-201ENST00000425769 204 ntBASIC-0.02□□□□□ -2.41
H3F3AP84243 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.02□□□□□ -2.41
H3F3AP84243 AC079781.2-201ENST00000446424 169 ntBASIC-0.02□□□□□ -2.41
H3F3AP84243 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.02□□□□□ -2.41
H3F3AP84243 AC022878.1-201ENST00000530684 149 ntBASIC-0.02□□□□□ -2.41
H3F3AP84243 BNIP3P39-201ENST00000601077 554 ntBASIC-0.02□□□□□ -2.41
H3F3AP84243 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.02□□□□□ -2.41
H3F3AP84243 ZNF204P-201ENST00000416749 2397 ntBASIC-0.02□□□□□ -2.41
H3F3AP84243 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.03□□□□□ -2.41
H3F3AP84243 MIRLET7C-201ENST00000362160 84 ntBASIC-0.03□□□□□ -2.41
H3F3AP84243 CALM2P3-201ENST00000400429 449 ntBASIC-0.03□□□□□ -2.41
H3F3AP84243 MTND3P9-201ENST00000429526 346 ntBASIC-0.03□□□□□ -2.41
H3F3AP84243 AC084290.1-201ENST00000434995 374 ntBASIC-0.03□□□□□ -2.41
H3F3AP84243 RN7SKP164-201ENST00000516138 266 ntBASIC-0.03□□□□□ -2.41
H3F3AP84243 AL162730.1-201ENST00000605734 292 ntBASIC-0.03□□□□□ -2.41
H3F3AP84243 RNU4-5P-201ENST00000607255 135 ntBASIC-0.03□□□□□ -2.41
H3F3AP84243 RMST_3.1-201ENST00000611651 109 ntBASIC-0.03□□□□□ -2.41
H3F3AP84243 AC092634.7-201ENST00000621022 103 ntBASIC-0.03□□□□□ -2.41
H3F3AP84243 MTND4P4-201ENST00000439033 1366 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 MTND4P9-201ENST00000507819 1346 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 MIR573-201ENST00000384964 99 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 MIR1185-2-201ENST00000408687 86 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 GPR143P-201ENST00000434155 205 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 MTCO3P10-201ENST00000455912 772 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 SCARNA18-201ENST00000459004 134 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.04□□□□□ -2.42
H3F3AP84243 AC074133.1-201ENST00000515696 183 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 RNU6-430P-201ENST00000517078 107 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 MTCO3P23-201ENST00000561363 289 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 SNORD11B-201ENST00000607707 90 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 AC091304.9-201ENST00000612091 226 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 MIR8087-201ENST00000612745 78 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 AC137590.2-201ENST00000619709 240 ntBASIC-0.04□□□□□ -2.42
H3F3AP84243 MIR1-1-201ENST00000362147 71 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 SNORD73A-201ENST00000386062 65 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 RNA5SP63-201ENST00000391225 112 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.05□□□□□ -2.42
H3F3AP84243 RPS29P27-201ENST00000463711 170 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.05□□□□□ -2.42
H3F3AP84243 RNU2-46P-201ENST00000517038 113 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.05□□□□□ -2.42
H3F3AP84243 MTND2P32-201ENST00000521584 1038 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 MRPS36P4-201ENST00000534436 298 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.05□□□□□ -2.42
H3F3AP84243 AC023157.2-201ENST00000540596 141 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.05□□□□□ -2.42
H3F3AP84243 AC022523.2-201ENST00000561045 150 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 MIR4703-201ENST00000577728 79 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 MIR4999-201ENST00000585029 91 ntBASIC-0.05□□□□□ -2.42
H3F3AP84243 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.05□□□□□ -2.42
H3F3AP84243 RNU6-137P-201ENST00000363680 108 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 RNU6-74P-201ENST00000384235 107 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 RNA5SP482-201ENST00000391269 118 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 AL512286.1-201ENST00000439244 400 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 MRPS10P1-201ENST00000448483 130 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 AC093534.1-201ENST00000504977 132 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 MTND1P22-201ENST00000510572 951 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.06□□□□□ -2.42
H3F3AP84243 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.06□□□□□ -2.42
H3F3AP84243 SNORD27.1-201ENST00000516319 72 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
H3F3AP84243 MIR3941-201ENST00000582572 103 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 MIR4768-201ENST00000585270 74 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 AC015726.2-201ENST00000620112 122 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 AC006927.3-201ENST00000638789 384 ntBASIC-0.06□□□□□ -2.42
H3F3AP84243 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 SNORD113.3-201ENST00000364630 78 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 SNORD87-201ENST00000364849 89 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 RNU6-815P-201ENST00000384080 113 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 RNU6-906P-201ENST00000384700 70 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
H3F3AP84243 MIR891A-201ENST00000401237 79 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 HMGN2P26-201ENST00000463169 339 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 AF186996.7-201ENST00000492781 209 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
H3F3AP84243 SNORA25.12-201ENST00000516202 82 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 RNA5SP480-201ENST00000516840 109 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 AC104383.1-201ENST00000530297 370 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 AC027288.2-201ENST00000553028 243 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 MIR5190-201ENST00000581537 80 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 AC007684.1-201ENST00000609671 477 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 uc_338.11-201ENST00000619132 160 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.07□□□□□ -2.42
H3F3AP84243 SNORA1B-201ENST00000362535 133 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms