Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.6□□□□□ -2.15
SRPXP78539 HMGN2P19-201ENST00000425149 265 ntBASIC1.6□□□□□ -2.15
SRPXP78539 MTND1P14-201ENST00000427400 950 ntBASIC1.6□□□□□ -2.15
SRPXP78539 AC007677.1-201ENST00000445757 515 ntBASIC1.6□□□□□ -2.15
SRPXP78539 AC074290.1-201ENST00000448883 135 ntBASIC1.6□□□□□ -2.15
SRPXP78539 AC108938.1-201ENST00000451204 136 ntBASIC1.6□□□□□ -2.15
SRPXP78539 RNU6-625P-201ENST00000459412 107 ntBASIC1.6□□□□□ -2.15
SRPXP78539 RNU6-221P-201ENST00000459541 99 ntBASIC1.6□□□□□ -2.15
SRPXP78539 YWHAEP4-201ENST00000505390 198 ntBASIC1.6□□□□□ -2.15
SRPXP78539 AC011406.1-201ENST00000512440 370 ntBASIC1.6□□□□□ -2.15
SRPXP78539 RNU2-34P-201ENST00000516534 121 ntBASIC1.6□□□□□ -2.15
SRPXP78539 Y_RNA.701-201ENST00000516812 110 ntBASIC1.6□□□□□ -2.15
SRPXP78539 MIR2355-201ENST00000517199 87 ntBASIC1.6□□□□□ -2.15
SRPXP78539 AC025647.1-201ENST00000517879 253 ntBASIC1.6□□□□□ -2.15
SRPXP78539 IGKV3-31-201ENST00000523109 329 ntBASIC1.6□□□□□ -2.15
SRPXP78539 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.6□□□□□ -2.15
SRPXP78539 AC055872.1-201ENST00000570978 278 ntBASIC1.6□□□□□ -2.15
SRPXP78539 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.6□□□□□ -2.15
SRPXP78539 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.6□□□□□ -2.15
SRPXP78539 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.59□□□□□ -2.15
SRPXP78539 RNY3P4-201ENST00000384428 101 ntBASIC1.59□□□□□ -2.15
SRPXP78539 Y_RNA.510-201ENST00000384511 114 ntBASIC1.59□□□□□ -2.15
SRPXP78539 MIR634-201ENST00000385208 97 ntBASIC1.59□□□□□ -2.15
SRPXP78539 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SRPXP78539 RAB28P5-201ENST00000427490 651 ntBASIC1.59□□□□□ -2.15
SRPXP78539 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.59□□□□□ -2.15
SRPXP78539 ATP5J2P3-201ENST00000451550 258 ntBASIC1.59□□□□□ -2.15
SRPXP78539 Y_RNA.631-201ENST00000459607 101 ntBASIC1.59□□□□□ -2.15
SRPXP78539 RPL26P26-201ENST00000480251 434 ntBASIC1.59□□□□□ -2.15
SRPXP78539 HMGB3P17-201ENST00000504195 649 ntBASIC1.59□□□□□ -2.15
SRPXP78539 RNU6-408P-201ENST00000515910 100 ntBASIC1.59□□□□□ -2.15
SRPXP78539 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.59□□□□□ -2.15
SRPXP78539 HSBP1P1-201ENST00000555205 166 ntBASIC1.59□□□□□ -2.15
SRPXP78539 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.59□□□□□ -2.15
SRPXP78539 MIR5094-201ENST00000578766 85 ntBASIC1.59□□□□□ -2.15
SRPXP78539 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.59□□□□□ -2.15
SRPXP78539 AC022140.2-201ENST00000623500 188 ntBASIC1.59□□□□□ -2.15
SRPXP78539 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.59□□□□□ -2.16
SRPXP78539 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
SRPXP78539 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SRPXP78539 Y_RNA.498-201ENST00000384460 102 ntBASIC1.58□□□□□ -2.16
SRPXP78539 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SRPXP78539 AL117342.1-201ENST00000404861 406 ntBASIC1.58□□□□□ -2.16
SRPXP78539 AC009963.1-201ENST00000417265 157 ntBASIC1.58□□□□□ -2.16
SRPXP78539 HMGN2P34-201ENST00000437647 269 ntBASIC1.58□□□□□ -2.16
SRPXP78539 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
SRPXP78539 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.58□□□□□ -2.16
SRPXP78539 NDUFB4P10-201ENST00000452541 359 ntBASIC1.58□□□□□ -2.16
SRPXP78539 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.58□□□□□ -2.16
SRPXP78539 RNU6-911P-201ENST00000516523 104 ntBASIC1.58□□□□□ -2.16
SRPXP78539 RNU6-1012P-201ENST00000516606 109 ntBASIC1.58□□□□□ -2.16
SRPXP78539 SUMO2P18-201ENST00000518873 252 ntBASIC1.58□□□□□ -2.16
SRPXP78539 AC027419.1-201ENST00000522976 328 ntBASIC1.58□□□□□ -2.16
SRPXP78539 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.58□□□□□ -2.16
SRPXP78539 AC020661.2-201ENST00000560114 134 ntBASIC1.58□□□□□ -2.16
SRPXP78539 MIR5089-201ENST00000580047 84 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.15-201ENST00000611544 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.16-201ENST00000613119 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.12-201ENST00000613778 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.20-201ENST00000613956 192 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.9-201ENST00000615427 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.11-201ENST00000616345 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.2-201ENST00000616535 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.3-201ENST00000617785 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.19-201ENST00000618602 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 RNU2-1-201ENST00000618664 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.6-201ENST00000619225 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.5-201ENST00000619465 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 U2.10-201ENST00000620268 191 ntBASIC1.58□□□□□ -2.16
SRPXP78539 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
SRPXP78539 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.58□□□□□ -2.16
SRPXP78539 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.58□□□□□ -2.16
SRPXP78539 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SRPXP78539 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SRPXP78539 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SRPXP78539 Y_RNA.27-201ENST00000362540 103 ntBASIC1.57□□□□□ -2.16
SRPXP78539 RNU6-454P-201ENST00000364292 107 ntBASIC1.57□□□□□ -2.16
SRPXP78539 SNORA16.1-201ENST00000364597 132 ntBASIC1.57□□□□□ -2.16
SRPXP78539 Y_RNA.287-201ENST00000364853 94 ntBASIC1.57□□□□□ -2.16
SRPXP78539 SNORA22B-201ENST00000383876 138 ntBASIC1.57□□□□□ -2.16
SRPXP78539 RNU6-1264P-201ENST00000383891 107 ntBASIC1.57□□□□□ -2.16
SRPXP78539 RNU6-417P-201ENST00000384712 107 ntBASIC1.57□□□□□ -2.16
SRPXP78539 SNORA48.1-201ENST00000390879 135 ntBASIC1.57□□□□□ -2.16
SRPXP78539 SNORD78.2-201ENST00000391076 69 ntBASIC1.57□□□□□ -2.16
SRPXP78539 MIR548P-201ENST00000408336 84 ntBASIC1.57□□□□□ -2.16
SRPXP78539 AL139156.1-201ENST00000412785 841 ntBASIC1.57□□□□□ -2.16
SRPXP78539 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.57□□□□□ -2.16
SRPXP78539 RPL31P63-201ENST00000422565 375 ntBASIC1.57□□□□□ -2.16
SRPXP78539 AL356320.1-201ENST00000429616 163 ntBASIC1.57□□□□□ -2.16
SRPXP78539 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.57□□□□□ -2.16
SRPXP78539 MTND2P29-201ENST00000438595 412 ntBASIC1.57□□□□□ -2.16
SRPXP78539 AL353689.1-201ENST00000438895 199 ntBASIC1.57□□□□□ -2.16
SRPXP78539 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.57□□□□□ -2.16
SRPXP78539 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.57□□□□□ -2.16
SRPXP78539 AC074133.1-201ENST00000515696 183 ntBASIC1.57□□□□□ -2.16
SRPXP78539 MIR4659A-201ENST00000580269 81 ntBASIC1.57□□□□□ -2.16
SRPXP78539 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
SRPXP78539 MIR3171-201ENST00000584270 74 ntBASIC1.57□□□□□ -2.16
SRPXP78539 AC005786.1-201ENST00000588553 154 ntBASIC1.57□□□□□ -2.16
SRPXP78539 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms