Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 Y_RNA.409-201ENST00000383990 98 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 RNU6-950P-201ENST00000384651 107 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 CALM2P3-201ENST00000400429 449 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 MIR1197-201ENST00000408818 88 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.09□□□□□ -2.23
CNTNAP1P78357 AL135790.2-201ENST00000437701 267 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.09□□□□□ -2.23
CNTNAP1P78357 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.09□□□□□ -2.23
CNTNAP1P78357 RNU7-57P-201ENST00000459540 60 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 RPL23AP75-201ENST00000491601 451 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 RNU6-1332P-201ENST00000516666 104 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 RNA5SP54-201ENST00000516951 92 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 DEFB108E-201ENST00000524692 240 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.09□□□□□ -2.23
CNTNAP1P78357 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.09□□□□□ -2.23
CNTNAP1P78357 MIR4742-201ENST00000581069 85 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 MIR3611-201ENST00000584484 83 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 AL359880.1-201ENST00000621879 266 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 MIR6863-201ENST00000636112 90 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 AC068137.3-201ENST00000639191 341 ntBASIC1.09□□□□□ -2.23
CNTNAP1P78357 AP000568.1-201ENST00000282964 442 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 SNORD113-7-201ENST00000363762 77 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 Y_RNA.287-201ENST00000364853 94 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 SNORA4.2-201ENST00000365313 147 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 RNU6-259P-201ENST00000383999 107 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 RNU6-245P-201ENST00000384020 107 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 MTCO3P40-201ENST00000392516 676 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 AF228730.1-201ENST00000397972 663 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 MIR450B-201ENST00000401182 78 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 RNA5SP193-201ENST00000410353 107 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.08□□□□□ -2.24
CNTNAP1P78357 AC008134.1-201ENST00000420943 193 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.08□□□□□ -2.24
CNTNAP1P78357 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.08□□□□□ -2.24
CNTNAP1P78357 Y_RNA.693-201ENST00000516641 110 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 AC026407.1-201ENST00000518369 204 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.08□□□□□ -2.24
CNTNAP1P78357 AC026371.1-201ENST00000551867 419 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 AC146944.4-201ENST00000602697 718 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 RNU6-89P-201ENST00000606519 100 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 AC006001.4-201ENST00000622243 395 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 AL078596.1-201ENST00000624856 447 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 snoZ196.1-201ENST00000625269 89 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
CNTNAP1P78357 RNU6-1123P-201ENST00000362347 106 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 SNORA33-201ENST00000363664 130 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 RNU6-331P-201ENST00000384724 107 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 MIR1253-201ENST00000408273 105 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 RNU6-57P-201ENST00000411348 103 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 SNX2P2-201ENST00000424553 323 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 ERLEC1P1-201ENST00000433806 578 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 RNU6-221P-201ENST00000459541 99 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 HMGN1P12-201ENST00000499125 195 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 AL158209.2-201ENST00000619266 216 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 AC124864.2-201ENST00000624736 186 ntBASIC1.08□□□□□ -2.24
CNTNAP1P78357 SNORD115-32-201ENST00000364079 82 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 RNU6-417P-201ENST00000384712 107 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CNTNAP1P78357 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CNTNAP1P78357 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.07□□□□□ -2.24
CNTNAP1P78357 AC016909.1-201ENST00000415916 166 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 MTATP6P17-201ENST00000431030 672 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 SEPT14P3-201ENST00000439401 183 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.07□□□□□ -2.24
CNTNAP1P78357 AL732372.2-207ENST00000445840 183 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 SEPT14P2-201ENST00000453405 183 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 AC079354.2-201ENST00000453523 154 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 RPS26P45-201ENST00000471748 340 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 SEPT14P4-201ENST00000513445 186 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 RNU6-1198P-201ENST00000516904 67 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 AC025647.1-201ENST00000517879 253 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 FO082796.1-201ENST00000523795 183 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 AL442163.3-201ENST00000554110 156 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.07□□□□□ -2.24
CNTNAP1P78357 MIR4711-201ENST00000578274 70 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 SNORD11B-201ENST00000607707 90 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 ZNF204P-201ENST00000416749 2397 ntBASIC1.07□□□□□ -2.24
CNTNAP1P78357 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CNTNAP1P78357 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CNTNAP1P78357 SNORD50.1-201ENST00000362987 71 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 RNU6-254P-201ENST00000363377 107 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 RNU2-66P-201ENST00000410650 161 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.06□□□□□ -2.24
CNTNAP1P78357 NDUFB4P10-201ENST00000452541 359 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 RNU7-34P-201ENST00000459394 64 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.06□□□□□ -2.24
CNTNAP1P78357 TRBVA-201ENST00000498804 316 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 RNU11-2P-201ENST00000516898 142 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 MTND1P5-201ENST00000517906 940 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 AL512310.8-201ENST00000550183 120 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 AC133485.1-201ENST00000567176 124 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 AC138907.6-201ENST00000568401 126 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 MTND1P15-201ENST00000579262 949 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 AC040896.1-201ENST00000613819 479 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 MIR2909-201ENST00000617113 69 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.06□□□□□ -2.24
CNTNAP1P78357 RNU6-137P-201ENST00000363680 108 ntBASIC1.05□□□□□ -2.24
CNTNAP1P78357 Y_RNA.274-201ENST00000364714 101 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms