Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 uc_338.1-201ENST00000612113 180 ntBASIC3.16□□□□□ -1.9
YBX1P67809 AC068647.2-201ENST00000637380 353 ntBASIC3.16□□□□□ -1.9
YBX1P67809 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
YBX1P67809 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
YBX1P67809 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
YBX1P67809 AC026241.1-201ENST00000517873 2142 ntBASIC3.16□□□□□ -1.9
YBX1P67809 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.16□□□□□ -1.9
YBX1P67809 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
YBX1P67809 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.15□□□□□ -1.9
YBX1P67809 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
YBX1P67809 RNU6-834P-201ENST00000362367 110 ntBASIC3.15□□□□□ -1.91
YBX1P67809 RNU1-57P-201ENST00000384491 166 ntBASIC3.15□□□□□ -1.91
YBX1P67809 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
YBX1P67809 AL159169.1-201ENST00000421119 127 ntBASIC3.15□□□□□ -1.91
YBX1P67809 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.15□□□□□ -1.91
YBX1P67809 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.15□□□□□ -1.91
YBX1P67809 RPL23AP67-201ENST00000465341 474 ntBASIC3.15□□□□□ -1.91
YBX1P67809 RNU6-659P-201ENST00000516454 104 ntBASIC3.15□□□□□ -1.91
YBX1P67809 Z83843.1-201ENST00000604070 3685 ntBASIC3.15□□□□□ -1.91
YBX1P67809 Y_RNA.393-201ENST00000383936 102 ntBASIC3.14□□□□□ -1.91
YBX1P67809 RNU6-750P-201ENST00000390946 107 ntBASIC3.14□□□□□ -1.91
YBX1P67809 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.14□□□□□ -1.91
YBX1P67809 EEF1B2P7-201ENST00000451177 676 ntBASIC3.14□□□□□ -1.91
YBX1P67809 RPS27P29-201ENST00000463110 252 ntBASIC3.14□□□□□ -1.91
YBX1P67809 RPL36AP48-201ENST00000485521 314 ntBASIC3.14□□□□□ -1.91
YBX1P67809 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.14□□□□□ -1.91
YBX1P67809 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.14□□□□□ -1.91
YBX1P67809 YPEL5P2-201ENST00000605553 359 ntBASIC3.14□□□□□ -1.91
YBX1P67809 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.14□□□□□ -1.91
YBX1P67809 MIR548AY-201ENST00000617669 107 ntBASIC3.14□□□□□ -1.91
YBX1P67809 AP001340.1-201ENST00000624405 217 ntBASIC3.14□□□□□ -1.91
YBX1P67809 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.14□□□□□ -1.91
YBX1P67809 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
YBX1P67809 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
YBX1P67809 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
YBX1P67809 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
YBX1P67809 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
YBX1P67809 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
YBX1P67809 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
YBX1P67809 Y_RNA.124-201ENST00000363339 93 ntBASIC3.13□□□□□ -1.91
YBX1P67809 MIR518C-201ENST00000384822 101 ntBASIC3.13□□□□□ -1.91
YBX1P67809 SNORA36B-201ENST00000410438 131 ntBASIC3.13□□□□□ -1.91
YBX1P67809 CYCSP49-201ENST00000420810 319 ntBASIC3.13□□□□□ -1.91
YBX1P67809 AL031183.1-201ENST00000457667 207 ntBASIC3.13□□□□□ -1.91
YBX1P67809 RNU7-107P-201ENST00000459121 61 ntBASIC3.13□□□□□ -1.91
YBX1P67809 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.13□□□□□ -1.91
YBX1P67809 MIR2682-201ENST00000580305 110 ntBASIC3.13□□□□□ -1.91
YBX1P67809 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
YBX1P67809 AC104984.5-201ENST00000586878 94 ntBASIC3.13□□□□□ -1.91
YBX1P67809 AL031274.2-201ENST00000599419 203 ntBASIC3.13□□□□□ -1.91
YBX1P67809 U7.2-201ENST00000607576 63 ntBASIC3.13□□□□□ -1.91
YBX1P67809 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.13□□□□□ -1.91
YBX1P67809 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
YBX1P67809 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.13□□□□□ -1.91
YBX1P67809 AC017071.1-201ENST00000564407 2204 ntBASIC3.13□□□□□ -1.91
YBX1P67809 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
YBX1P67809 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
YBX1P67809 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.12□□□□□ -1.91
YBX1P67809 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
YBX1P67809 MIR1185-2-201ENST00000408687 86 ntBASIC3.12□□□□□ -1.91
YBX1P67809 Y_RNA.622-201ENST00000411091 108 ntBASIC3.12□□□□□ -1.91
YBX1P67809 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.12□□□□□ -1.91
YBX1P67809 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.12□□□□□ -1.91
YBX1P67809 RN7SL330P-201ENST00000469709 307 ntBASIC3.12□□□□□ -1.91
YBX1P67809 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.12□□□□□ -1.91
YBX1P67809 RN7SL504P-201ENST00000494496 287 ntBASIC3.12□□□□□ -1.91
YBX1P67809 RPS27P26-201ENST00000494583 239 ntBASIC3.12□□□□□ -1.91
YBX1P67809 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
YBX1P67809 RAC1P5-201ENST00000512182 576 ntBASIC3.12□□□□□ -1.91
YBX1P67809 RN7SKP179-201ENST00000516126 217 ntBASIC3.12□□□□□ -1.91
YBX1P67809 RNA5SP76-201ENST00000516277 87 ntBASIC3.12□□□□□ -1.91
YBX1P67809 RNU7-115P-201ENST00000516433 55 ntBASIC3.12□□□□□ -1.91
YBX1P67809 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.12□□□□□ -1.91
YBX1P67809 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.12□□□□□ -1.91
YBX1P67809 AL670379.2-201ENST00000604983 252 ntBASIC3.12□□□□□ -1.91
YBX1P67809 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
YBX1P67809 MAPK10-362ENST00000641864 4484 ntBASIC3.12□□□□□ -1.91
YBX1P67809 AC093831.2-201ENST00000624393 3427 ntBASIC3.12□□□□□ -1.91
YBX1P67809 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
YBX1P67809 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
YBX1P67809 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
YBX1P67809 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.11□□□□□ -1.91
YBX1P67809 SNORA63.4-201ENST00000362763 126 ntBASIC3.11□□□□□ -1.91
YBX1P67809 RNY1P11-201ENST00000363759 113 ntBASIC3.11□□□□□ -1.91
YBX1P67809 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
YBX1P67809 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
YBX1P67809 MIR586-201ENST00000385035 97 ntBASIC3.11□□□□□ -1.91
YBX1P67809 RNA5SP252-201ENST00000391131 119 ntBASIC3.11□□□□□ -1.91
YBX1P67809 RNA5SP354-201ENST00000391247 136 ntBASIC3.11□□□□□ -1.91
YBX1P67809 SNORA75.5-201ENST00000391291 81 ntBASIC3.11□□□□□ -1.91
YBX1P67809 RNU6-1064P-201ENST00000410626 104 ntBASIC3.11□□□□□ -1.91
YBX1P67809 AC010154.1-201ENST00000425857 269 ntBASIC3.11□□□□□ -1.91
YBX1P67809 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.11□□□□□ -1.91
YBX1P67809 PHBP14-201ENST00000512887 367 ntBASIC3.11□□□□□ -1.91
YBX1P67809 RNU5F-4P-201ENST00000516581 114 ntBASIC3.11□□□□□ -1.91
YBX1P67809 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.11□□□□□ -1.91
YBX1P67809 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.11□□□□□ -1.91
YBX1P67809 RPL17P51-201ENST00000605218 238 ntBASIC3.11□□□□□ -1.91
YBX1P67809 AC012640.5-201ENST00000623897 319 ntBASIC3.11□□□□□ -1.91
YBX1P67809 MIR7153-201ENST00000637758 57 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms