Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 RPL39P5-202ENST00000512505 151 ntBASIC0.19□□□□□ -2.38
SKP1P63208 AP003716.2-201ENST00000528260 108 ntBASIC0.19□□□□□ -2.38
SKP1P63208 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
SKP1P63208 MRPS36P4-201ENST00000534436 298 ntBASIC0.19□□□□□ -2.38
SKP1P63208 AC092354.1-201ENST00000606057 376 ntBASIC0.19□□□□□ -2.38
SKP1P63208 AP000240.1-201ENST00000609910 452 ntBASIC0.19□□□□□ -2.38
SKP1P63208 AC017083.3-201ENST00000609955 700 ntBASIC0.19□□□□□ -2.38
SKP1P63208 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
SKP1P63208 MIR103A2-201ENST00000362154 78 ntBASIC0.18□□□□□ -2.38
SKP1P63208 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.18□□□□□ -2.38
SKP1P63208 AC108740.1-201ENST00000498629 225 ntBASIC0.18□□□□□ -2.38
SKP1P63208 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.18□□□□□ -2.38
SKP1P63208 MIR3192-201ENST00000584920 77 ntBASIC0.18□□□□□ -2.38
SKP1P63208 7SK.7-201ENST00000603504 247 ntBASIC0.18□□□□□ -2.38
SKP1P63208 AL138726.1-201ENST00000614873 333 ntBASIC0.18□□□□□ -2.38
SKP1P63208 AC006435.5-201ENST00000624486 112 ntBASIC0.18□□□□□ -2.38
SKP1P63208 MIR6079-201ENST00000635807 62 ntBASIC0.18□□□□□ -2.38
SKP1P63208 ZNF204P-201ENST00000416749 2397 ntBASIC0.17□□□□□ -2.38
SKP1P63208 RNY1P4-201ENST00000384595 115 ntBASIC0.17□□□□□ -2.38
SKP1P63208 RNU6-606P-201ENST00000384721 111 ntBASIC0.17□□□□□ -2.38
SKP1P63208 MIR140-201ENST00000385282 100 ntBASIC0.17□□□□□ -2.38
SKP1P63208 AL390237.1-201ENST00000404226 1415 ntBASIC0.17□□□□□ -2.38
SKP1P63208 MTND3P9-201ENST00000429526 346 ntBASIC0.17□□□□□ -2.38
SKP1P63208 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.17□□□□□ -2.38
SKP1P63208 AC009961.2-201ENST00000435771 251 ntBASIC0.17□□□□□ -2.38
SKP1P63208 USP9YP29-201ENST00000445112 563 ntBASIC0.17□□□□□ -2.38
SKP1P63208 AL009048.1-201ENST00000450437 298 ntBASIC0.17□□□□□ -2.38
SKP1P63208 ZNF114P1-201ENST00000453500 292 ntBASIC0.17□□□□□ -2.38
SKP1P63208 AF186996.7-201ENST00000492781 209 ntBASIC0.17□□□□□ -2.38
SKP1P63208 RNA5SP54-201ENST00000516951 92 ntBASIC0.17□□□□□ -2.38
SKP1P63208 AL137161.1-201ENST00000532231 390 ntBASIC0.17□□□□□ -2.38
SKP1P63208 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.17□□□□□ -2.38
SKP1P63208 HIF1AP1-201ENST00000553642 175 ntBASIC0.17□□□□□ -2.38
SKP1P63208 MIR4438-201ENST00000585271 93 ntBASIC0.17□□□□□ -2.38
SKP1P63208 AL117336.2-201ENST00000602435 335 ntBASIC0.17□□□□□ -2.38
SKP1P63208 MIR924-201ENST00000638017 53 ntBASIC0.17□□□□□ -2.38
SKP1P63208 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
SKP1P63208 MIR193B-201ENST00000384907 83 ntBASIC0.16□□□□□ -2.38
SKP1P63208 MIR513B-201ENST00000385136 84 ntBASIC0.16□□□□□ -2.38
SKP1P63208 RNU6-177P-201ENST00000411257 104 ntBASIC0.16□□□□□ -2.38
SKP1P63208 MRPS10P1-201ENST00000448483 130 ntBASIC0.16□□□□□ -2.38
SKP1P63208 AP000870.1-201ENST00000472927 406 ntBASIC0.16□□□□□ -2.38
SKP1P63208 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
SKP1P63208 RNU2-56P-201ENST00000516826 190 ntBASIC0.16□□□□□ -2.38
SKP1P63208 MTND1P5-201ENST00000517906 940 ntBASIC0.16□□□□□ -2.38
SKP1P63208 ELOCP32-201ENST00000548625 324 ntBASIC0.16□□□□□ -2.38
SKP1P63208 FRG2DP-202ENST00000566967 323 ntBASIC0.16□□□□□ -2.38
SKP1P63208 Y_RNA.36-201ENST00000362602 112 ntBASIC0.15□□□□□ -2.39
SKP1P63208 SNORD73A-201ENST00000386062 65 ntBASIC0.15□□□□□ -2.39
SKP1P63208 RNA5SP482-201ENST00000391269 118 ntBASIC0.15□□□□□ -2.39
SKP1P63208 MTCO2P34-201ENST00000421994 607 ntBASIC0.15□□□□□ -2.39
SKP1P63208 AC005178.1-201ENST00000508392 440 ntBASIC0.15□□□□□ -2.39
SKP1P63208 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
SKP1P63208 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.15□□□□□ -2.39
SKP1P63208 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.15□□□□□ -2.39
SKP1P63208 AL022161.1-201ENST00000604390 213 ntBASIC0.15□□□□□ -2.39
SKP1P63208 RMST_3.1-201ENST00000611651 109 ntBASIC0.15□□□□□ -2.39
SKP1P63208 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.15□□□□□ -2.39
SKP1P63208 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.15□□□□□ -2.39
SKP1P63208 Y_RNA.123-201ENST00000363338 102 ntBASIC0.14□□□□□ -2.39
SKP1P63208 SNORD105-201ENST00000386910 85 ntBASIC0.14□□□□□ -2.39
SKP1P63208 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.14□□□□□ -2.39
SKP1P63208 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.14□□□□□ -2.39
SKP1P63208 Z84480.1-201ENST00000605131 311 ntBASIC0.14□□□□□ -2.39
SKP1P63208 AC122133.1-201ENST00000613964 233 ntBASIC0.14□□□□□ -2.39
SKP1P63208 MIRLET7C-201ENST00000362160 84 ntBASIC0.13□□□□□ -2.39
SKP1P63208 Y_RNA.336-201ENST00000365307 109 ntBASIC0.13□□□□□ -2.39
SKP1P63208 MIR526A1-201ENST00000384897 85 ntBASIC0.13□□□□□ -2.39
SKP1P63208 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
SKP1P63208 SNORD111-201ENST00000408139 94 ntBASIC0.13□□□□□ -2.39
SKP1P63208 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.13□□□□□ -2.39
SKP1P63208 AC091133.4-201ENST00000511142 308 ntBASIC0.13□□□□□ -2.39
SKP1P63208 RNU6-58P-201ENST00000517143 103 ntBASIC0.13□□□□□ -2.39
SKP1P63208 AP003461.1-201ENST00000528866 78 ntBASIC0.13□□□□□ -2.39
SKP1P63208 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.13□□□□□ -2.39
SKP1P63208 AC010620.1-201ENST00000601088 1102 ntBASIC0.13□□□□□ -2.39
SKP1P63208 AC023932.2-201ENST00000603176 175 ntBASIC0.13□□□□□ -2.39
SKP1P63208 RNU6-94P-201ENST00000607728 107 ntBASIC0.13□□□□□ -2.39
SKP1P63208 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.12□□□□□ -2.39
SKP1P63208 MIR1827-201ENST00000408549 66 ntBASIC0.12□□□□□ -2.39
SKP1P63208 MIR1185-1-201ENST00000408598 86 ntBASIC0.12□□□□□ -2.39
SKP1P63208 RPL31P35-201ENST00000431058 377 ntBASIC0.12□□□□□ -2.39
SKP1P63208 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.12□□□□□ -2.39
SKP1P63208 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.12□□□□□ -2.39
SKP1P63208 RNU6-341P-201ENST00000516973 96 ntBASIC0.12□□□□□ -2.39
SKP1P63208 AP001372.4-201ENST00000524889 472 ntBASIC0.12□□□□□ -2.39
SKP1P63208 AP002004.2-201ENST00000531656 154 ntBASIC0.12□□□□□ -2.39
SKP1P63208 SCOCP1-201ENST00000554676 349 ntBASIC0.12□□□□□ -2.39
SKP1P63208 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.12□□□□□ -2.39
SKP1P63208 AP002371.2-201ENST00000624450 503 ntBASIC0.12□□□□□ -2.39
SKP1P63208 OR5AK4P-201ENST00000635912 903 ntBASIC0.12□□□□□ -2.39
SKP1P63208 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.12□□□□□ -2.39
SKP1P63208 RNU6-833P-201ENST00000363486 107 ntBASIC0.11□□□□□ -2.39
SKP1P63208 SNORD115-8-201ENST00000363856 82 ntBASIC0.11□□□□□ -2.39
SKP1P63208 SNORD115-38-201ENST00000365037 82 ntBASIC0.11□□□□□ -2.39
SKP1P63208 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
SKP1P63208 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
SKP1P63208 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.11□□□□□ -2.39
SKP1P63208 RNU6-994P-201ENST00000410507 111 ntBASIC0.11□□□□□ -2.39
SKP1P63208 RNU6-195P-201ENST00000411352 109 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms