Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 RNU6-127P-201ENST00000390897 107 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 MTND3P1-201ENST00000441336 220 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 PCNPP5-201ENST00000452246 481 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 AC112204.1-201ENST00000502591 103 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 RNU7-129P-201ENST00000516128 62 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 SNORA74.3-201ENST00000517108 154 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 AC105185.1-201ENST00000518705 535 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.5□□□□□ -2.49
RPS28P62857 RPL21P9-201ENST00000556149 474 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 FRG2DP-202ENST00000566967 323 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 AC006157.1-201ENST00000611750 366 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 uc_338.6-201ENST00000613544 171 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 AC091925.1-201ENST00000623204 462 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 AC067863.3-201ENST00000624172 122 ntBASIC-0.5□□□□□ -2.49
RPS28P62857 MIR330-201ENST00000362196 94 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 RNU4-1-201ENST00000363925 141 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 MIR106A-201ENST00000384870 81 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 RNU2-59P-201ENST00000410482 191 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 AC098592.1-201ENST00000419352 333 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.51□□□□□ -2.49
RPS28P62857 snoU13.21-201ENST00000459368 105 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 AC091021.1-201ENST00000468051 388 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.51□□□□□ -2.49
RPS28P62857 AC079140.5-201ENST00000507882 310 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 RN7SKP287-201ENST00000516546 266 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 RNA5SP268-201ENST00000516828 124 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 AK6P2-201ENST00000549020 471 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.51□□□□□ -2.49
RPS28P62857 AL121992.2-201ENST00000606262 256 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 SNORD11B-201ENST00000607707 90 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 MIR8064-201ENST00000612863 90 ntBASIC-0.51□□□□□ -2.49
RPS28P62857 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.51□□□□□ -2.49
RPS28P62857 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 RNU6-613P-201ENST00000410412 108 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.52□□□□□ -2.49
RPS28P62857 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.52□□□□□ -2.49
RPS28P62857 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.52□□□□□ -2.49
RPS28P62857 MIR2115-201ENST00000516657 100 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 RNU6-341P-201ENST00000516973 96 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 RNU6-430P-201ENST00000517078 107 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 RNU6-323P-201ENST00000521915 107 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 AC016957.1-201ENST00000534895 309 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.52□□□□□ -2.49
RPS28P62857 AL158211.1-201ENST00000566763 763 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.52□□□□□ -2.49
RPS28P62857 AC012433.1-201ENST00000588916 398 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 AC120024.3-201ENST00000603167 156 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 AC138649.3-201ENST00000622154 254 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 AC022418.1-201ENST00000624118 445 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.52□□□□□ -2.49
RPS28P62857 SCARNA4-201ENST00000629045 128 ntBASIC-0.52□□□□□ -2.49
RPS28P62857 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
RPS28P62857 RNU6-137P-201ENST00000363680 108 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 SNORA2A-201ENST00000383885 135 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 MIR1185-2-201ENST00000408687 86 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.53□□□□□ -2.49
RPS28P62857 MTND1P4-201ENST00000435196 415 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 AL392103.1-201ENST00000447000 198 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.53□□□□□ -2.49
RPS28P62857 AC007215.1-201ENST00000464893 276 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.53□□□□□ -2.49
RPS28P62857 AC114811.1-201ENST00000507207 168 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 AC005178.1-201ENST00000508392 440 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 RNU7-43P-201ENST00000516554 64 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 BNIP3P40-201ENST00000596017 556 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 AC013244.3-201ENST00000605614 388 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 AC002044.1-201ENST00000606707 158 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 MIR6755-201ENST00000619993 66 ntBASIC-0.53□□□□□ -2.49
RPS28P62857 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 RNY1P12-201ENST00000364251 105 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 SNORD14C-201ENST00000365382 88 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 MIR15B-201ENST00000385045 98 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 MIR516B2-201ENST00000385190 85 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 SNORA11-201ENST00000408789 128 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 PIGPP3-201ENST00000425307 415 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 SNORD126-201ENST00000459475 77 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 MTCO2P6-201ENST00000463134 685 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 RPS29P27-201ENST00000463711 170 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 AC104692.1-201ENST00000472406 90 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 HIF1AP1-201ENST00000553642 175 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 AL359999.1-201ENST00000604513 294 ntBASIC-0.54□□□□□ -2.5
RPS28P62857 MIR193B-201ENST00000384907 83 ntBASIC-0.55□□□□□ -2.5
RPS28P62857 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.55□□□□□ -2.5
RPS28P62857 AC107401.1-201ENST00000503426 685 ntBASIC-0.55□□□□□ -2.5
RPS28P62857 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.55□□□□□ -2.5
RPS28P62857 AC097462.1-201ENST00000514125 324 ntBASIC-0.55□□□□□ -2.5
RPS28P62857 RNU7-172P-201ENST00000517125 64 ntBASIC-0.55□□□□□ -2.5
RPS28P62857 AC069113.1-201ENST00000517763 267 ntBASIC-0.55□□□□□ -2.5
RPS28P62857 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.55□□□□□ -2.5
RPS28P62857 MIR4743-201ENST00000584576 69 ntBASIC-0.55□□□□□ -2.5
RPS28P62857 AL670379.3-201ENST00000605040 251 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms