Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RNU6-413P-201ENST00000384115 107 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 MIR106A-201ENST00000384870 81 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 MIR643-201ENST00000385267 97 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 RNU6-747P-201ENST00000390928 104 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 RNU6-241P-201ENST00000391148 104 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 MIR892B-201ENST00000401279 77 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 AC010493.1-201ENST00000513479 292 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 SNORA74.3-201ENST00000517108 154 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 AC105185.1-201ENST00000518705 535 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.62□□□□□ -2.51
CKS1BP61024 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
CKS1BP61024 AC010999.1-201ENST00000611856 324 ntBASIC-0.62□□□□□ -2.51
CKS1BP61024 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
CKS1BP61024 RNA5SP325-201ENST00000363756 130 ntBASIC-0.63□□□□□ -2.51
CKS1BP61024 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.63□□□□□ -2.51
CKS1BP61024 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.63□□□□□ -2.51
CKS1BP61024 MIR558-201ENST00000384920 94 ntBASIC-0.63□□□□□ -2.51
CKS1BP61024 MIR452-201ENST00000385020 85 ntBASIC-0.63□□□□□ -2.51
CKS1BP61024 RNU6-127P-201ENST00000390897 107 ntBASIC-0.63□□□□□ -2.51
CKS1BP61024 PCNPP3-201ENST00000393579 471 ntBASIC-0.63□□□□□ -2.51
CKS1BP61024 RPS24P1-201ENST00000438550 371 ntBASIC-0.63□□□□□ -2.51
CKS1BP61024 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.63□□□□□ -2.51
CKS1BP61024 RNA5SP454-201ENST00000517231 127 ntBASIC-0.63□□□□□ -2.51
CKS1BP61024 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.63□□□□□ -2.51
CKS1BP61024 AC006386.1-201ENST00000619436 415 ntBASIC-0.63□□□□□ -2.51
CKS1BP61024 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 RNU6-923P-201ENST00000364753 107 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 RNU6-641P-201ENST00000384006 107 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 RNU6-39P-201ENST00000384344 107 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 MIR489-201ENST00000384923 84 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.64□□□□□ -2.51
CKS1BP61024 AL353997.1-201ENST00000432936 108 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.64□□□□□ -2.51
CKS1BP61024 MTCO2P29-201ENST00000465212 189 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 RNU6-58P-201ENST00000517143 103 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 AC103996.1-201ENST00000555468 102 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 AC005176.2-201ENST00000596933 147 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 MIR8064-201ENST00000612863 90 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 AC121333.1-201ENST00000567488 2709 ntBASIC-0.64□□□□□ -2.51
CKS1BP61024 RNU6-756P-201ENST00000383997 107 ntBASIC-0.65□□□□□ -2.51
CKS1BP61024 SNORD100-201ENST00000408573 76 ntBASIC-0.65□□□□□ -2.51
CKS1BP61024 MIR1302-7-201ENST00000408841 72 ntBASIC-0.65□□□□□ -2.51
CKS1BP61024 MTND1P4-201ENST00000435196 415 ntBASIC-0.65□□□□□ -2.51
CKS1BP61024 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.65□□□□□ -2.51
CKS1BP61024 AL031274.1-201ENST00000450334 232 ntBASIC-0.65□□□□□ -2.51
CKS1BP61024 PCNPP5-201ENST00000452246 481 ntBASIC-0.65□□□□□ -2.51
CKS1BP61024 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.65□□□□□ -2.51
CKS1BP61024 RNU6-344P-201ENST00000516635 111 ntBASIC-0.65□□□□□ -2.51
CKS1BP61024 AP002004.2-201ENST00000531656 154 ntBASIC-0.65□□□□□ -2.51
CKS1BP61024 MRPS36P4-201ENST00000534436 298 ntBASIC-0.65□□□□□ -2.51
CKS1BP61024 MIR4438-201ENST00000585271 93 ntBASIC-0.65□□□□□ -2.51
CKS1BP61024 AC092447.9-201ENST00000603395 144 ntBASIC-0.65□□□□□ -2.51
CKS1BP61024 RNA5SP457-201ENST00000363657 124 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 SNORA1.1-201ENST00000364671 133 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 RNU6-827P-201ENST00000365553 106 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 SNORD14.1-201ENST00000365609 90 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 RNA5SP95-201ENST00000410319 137 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.66□□□□□ -2.52
CKS1BP61024 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 RNU7-56P-201ENST00000458744 62 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 AC007215.1-201ENST00000464893 276 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 AC107401.1-201ENST00000503426 685 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 AC116353.3-201ENST00000511215 249 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 RNU7-43P-201ENST00000516554 64 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 AC104383.1-201ENST00000530297 370 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 AC027279.3-201ENST00000625055 122 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.66□□□□□ -2.52
CKS1BP61024 AL445984.1-201ENST00000637834 659 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 ZNF204P-201ENST00000416749 2397 ntBASIC-0.66□□□□□ -2.52
CKS1BP61024 SNORA18.1-201ENST00000363418 128 ntBASIC-0.67□□□□□ -2.52
CKS1BP61024 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.67□□□□□ -2.52
CKS1BP61024 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.67□□□□□ -2.52
CKS1BP61024 MIR1185-2-201ENST00000408687 86 ntBASIC-0.67□□□□□ -2.52
CKS1BP61024 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.67□□□□□ -2.52
CKS1BP61024 MIR2115-201ENST00000516657 100 ntBASIC-0.67□□□□□ -2.52
CKS1BP61024 RNU6-341P-201ENST00000516973 96 ntBASIC-0.67□□□□□ -2.52
CKS1BP61024 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.67□□□□□ -2.52
CKS1BP61024 MIR4804-201ENST00000581683 73 ntBASIC-0.67□□□□□ -2.52
CKS1BP61024 AC008507.2-201ENST00000588402 1176 ntBASIC-0.67□□□□□ -2.52
CKS1BP61024 AC068790.2-201ENST00000602601 557 ntBASIC-0.67□□□□□ -2.52
CKS1BP61024 SNORA1B-201ENST00000362535 133 ntBASIC-0.68□□□□□ -2.52
CKS1BP61024 RNU6-179P-201ENST00000363350 107 ntBASIC-0.68□□□□□ -2.52
CKS1BP61024 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.68□□□□□ -2.52
CKS1BP61024 MIR320B2-201ENST00000408479 138 ntBASIC-0.68□□□□□ -2.52
CKS1BP61024 ZNF885P-201ENST00000420174 1098 ntBASIC-0.68□□□□□ -2.52
CKS1BP61024 MRPS10P1-201ENST00000448483 130 ntBASIC-0.68□□□□□ -2.52
CKS1BP61024 RNU7-159P-201ENST00000459284 62 ntBASIC-0.68□□□□□ -2.52
CKS1BP61024 MIR6755-201ENST00000619993 66 ntBASIC-0.68□□□□□ -2.52
CKS1BP61024 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.69□□□□□ -2.52
CKS1BP61024 MIR454-201ENST00000390180 115 ntBASIC-0.69□□□□□ -2.52
CKS1BP61024 MTCYBP36-201ENST00000404146 440 ntBASIC-0.69□□□□□ -2.52
CKS1BP61024 MTND3P20-201ENST00000407663 186 ntBASIC-0.69□□□□□ -2.52
CKS1BP61024 MTCO2P23-201ENST00000425216 680 ntBASIC-0.69□□□□□ -2.52
CKS1BP61024 MTND2P38-201ENST00000522536 667 ntBASIC-0.69□□□□□ -2.52
CKS1BP61024 FRG2DP-202ENST00000566967 323 ntBASIC-0.69□□□□□ -2.52
CKS1BP61024 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms