Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RNU1-62P-201ENST00000362599 164 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 Y_RNA.80-201ENST00000362996 102 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 SNORD115-3-201ENST00000363100 82 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 Y_RNA.238-201ENST00000364441 102 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 Y_RNA.485-201ENST00000384395 102 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 SNORA8-201ENST00000384574 139 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 RNA5SP201-201ENST00000410316 124 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.65□□□□□ -2.15
RIPK4P57078 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.65□□□□□ -2.15
RIPK4P57078 AC018865.2-201ENST00000423631 129 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 MTCO2P12-201ENST00000427426 682 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 AC021146.2-201ENST00000504736 556 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 AC105758.1-201ENST00000506038 399 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 AC093259.1-201ENST00000509755 300 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.65□□□□□ -2.15
RIPK4P57078 MIR3171-201ENST00000584270 74 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 MIR1244-1-201ENST00000612829 85 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 AL773524.1-201ENST00000614065 229 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.65□□□□□ -2.15
RIPK4P57078 AC091925.1-201ENST00000623204 462 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 MIR1244-3-201ENST00000635744 85 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 MIR1244-2-201ENST00000636449 85 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 MIR1244-4-202ENST00000636813 85 ntBASIC1.65□□□□□ -2.15
RIPK4P57078 ZNF299P-201ENST00000406845 1804 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 RNU1-58P-201ENST00000362413 163 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 Y_RNA.405-201ENST00000383979 100 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 RNU6-968P-201ENST00000384076 107 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 Y_RNA.451-201ENST00000384200 100 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 RNU6-378P-201ENST00000384324 107 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 Y_RNA.524-201ENST00000384564 100 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 Y_RNA.561-201ENST00000384694 100 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 AC096644.2-201ENST00000429278 159 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 AL160004.2-201ENST00000432935 350 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 RPL23AP50-201ENST00000434149 455 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.64□□□□□ -2.15
RIPK4P57078 RNU1-98P-201ENST00000458992 160 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 U8.22-201ENST00000459141 133 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 RPL17P19-201ENST00000489069 552 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 AC145146.1-201ENST00000496370 254 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 AC114801.2-201ENST00000503825 781 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 TRMT112P2-201ENST00000512910 132 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 Y_RNA.661-201ENST00000516003 99 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.64□□□□□ -2.15
RIPK4P57078 Z98751.3-201ENST00000604447 521 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 AL353621.2-201ENST00000605340 133 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 AL355802.3-201ENST00000607571 545 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.64□□□□□ -2.15
RIPK4P57078 AC007485.1-201ENST00000616755 206 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 AC087588.2-201ENST00000617667 426 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 AC090971.5-201ENST00000621102 293 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.64□□□□□ -2.15
RIPK4P57078 AC233981.2-201ENST00000611524 1614 ntBASIC1.64□□□□□ -2.15
RIPK4P57078 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RIPK4P57078 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.64□□□□□ -2.15
RIPK4P57078 RNU6-1227P-201ENST00000383981 107 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 Y_RNA.431-201ENST00000384086 102 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RIPK4P57078 SNORA12.2-201ENST00000391040 156 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 SNORA12-201ENST00000391162 147 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 RNA5SP212-201ENST00000391223 107 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 RNU6-1156P-201ENST00000410365 100 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.63□□□□□ -2.15
RIPK4P57078 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.63□□□□□ -2.15
RIPK4P57078 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.63□□□□□ -2.15
RIPK4P57078 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RIPK4P57078 TOMM22P6-201ENST00000465035 409 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 AC087477.1-201ENST00000465747 340 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 AC016632.1-201ENST00000503994 196 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.63□□□□□ -2.15
RIPK4P57078 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.63□□□□□ -2.15
RIPK4P57078 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.63□□□□□ -2.15
RIPK4P57078 RNU6-1137P-201ENST00000517073 99 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.63□□□□□ -2.15
RIPK4P57078 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.63□□□□□ -2.15
RIPK4P57078 AC138305.3-201ENST00000624988 240 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 AC134503.1-201ENST00000633048 54 ntBASIC1.63□□□□□ -2.15
RIPK4P57078 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RIPK4P57078 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RIPK4P57078 RNU6-490P-201ENST00000362985 107 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 Y_RNA.112-201ENST00000363250 102 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 Y_RNA.164-201ENST00000363709 102 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 Y_RNA.332-201ENST00000365271 113 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 SNORA22B-201ENST00000383876 138 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 RNY1P14-201ENST00000384426 108 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 MIR32-201ENST00000384965 70 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 AC244636.1-201ENST00000421152 228 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 AC012306.1-201ENST00000423267 114 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 AC005534.2-201ENST00000431047 433 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 AL445305.1-201ENST00000432577 575 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 snoU13.30-201ENST00000458951 104 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 RNU6-1170P-201ENST00000515974 106 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.62□□□□□ -2.15
RIPK4P57078 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.62□□□□□ -2.15
RIPK4P57078 AL590705.4-201ENST00000532209 134 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 AC022254.1-201ENST00000567857 235 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.62□□□□□ -2.15
RIPK4P57078 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.62□□□□□ -2.15
RIPK4P57078 AC073413.2-201ENST00000604332 360 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 SNORD58B-201ENST00000607313 66 ntBASIC1.62□□□□□ -2.15
RIPK4P57078 PCGEM1.1-201ENST00000613431 131 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms