Protein–RNA interactions for Protein: P55884

EIF3B, Eukaryotic translation initiation factor 3 subunit B, humanhuman

Known RBP Predictions only

Length 814 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3BP55884 AL080274.1-201ENST00000605565 220 ntBASIC2.04□□□□□ -2.08
EIF3BP55884 AC090574.1-201ENST00000623186 233 ntBASIC2.04□□□□□ -2.08
EIF3BP55884 AC138305.3-201ENST00000624988 240 ntBASIC2.04□□□□□ -2.08
EIF3BP55884 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.04□□□□□ -2.08
EIF3BP55884 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.03□□□□□ -2.08
EIF3BP55884 AC006026.1-201ENST00000444025 1803 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 Y_RNA.197-201ENST00000364004 102 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 Y_RNA.813-201ENST00000364639 102 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 RNU6-926P-201ENST00000384075 107 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 SNORA67.3-201ENST00000384366 140 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 AL139156.1-201ENST00000412785 841 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 AC016909.1-201ENST00000415916 166 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 HMGN2P34-201ENST00000437647 269 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.03□□□□□ -2.08
EIF3BP55884 RPL23AP3-201ENST00000453844 468 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 SNORA40.9-201ENST00000515895 93 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 RNU1-41P-201ENST00000516161 162 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 RNU1-48P-201ENST00000516400 162 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 AC025647.1-201ENST00000517879 253 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 CYCSP23-201ENST00000519781 313 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 AC018448.1-201ENST00000552843 316 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.03□□□□□ -2.08
EIF3BP55884 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.03□□□□□ -2.08
EIF3BP55884 AC092447.9-201ENST00000603395 144 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 Y_RNA.783-201ENST00000613546 102 ntBASIC2.03□□□□□ -2.08
EIF3BP55884 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
EIF3BP55884 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
EIF3BP55884 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
EIF3BP55884 Y_RNA.252-201ENST00000364556 101 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 Y_RNA.498-201ENST00000384460 102 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 Y_RNA.535-201ENST00000384612 99 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 MIR1253-201ENST00000408273 105 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 ELOCP21-201ENST00000412558 336 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 AL158823.1-201ENST00000418441 478 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 AC008134.1-201ENST00000420943 193 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 AC099677.2-201ENST00000436385 175 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 RNU6-625P-201ENST00000459412 107 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 AL442163.3-201ENST00000554110 156 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.02□□□□□ -2.09
EIF3BP55884 MIR4648-201ENST00000580107 72 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 AL109918.3-201ENST00000603072 338 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.02□□□□□ -2.09
EIF3BP55884 AC090971.5-201ENST00000621102 293 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 AL160413.1-201ENST00000622780 310 ntBASIC2.02□□□□□ -2.09
EIF3BP55884 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.02□□□□□ -2.09
EIF3BP55884 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
EIF3BP55884 AC008555.8-201ENST00000623602 2168 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 snoU2-30.2-201ENST00000362805 70 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 RNU1-96P-201ENST00000364163 162 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 RNU6-708P-201ENST00000384217 107 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 Y_RNA.460-201ENST00000384255 102 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 OOSP1P1-201ENST00000423265 274 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 TOMM22P2-201ENST00000430735 237 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.01□□□□□ -2.09
EIF3BP55884 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.01□□□□□ -2.09
EIF3BP55884 HMGN1P13-201ENST00000505795 138 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 AC074133.1-201ENST00000515696 183 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 IGKV3-31-201ENST00000523109 329 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.01□□□□□ -2.09
EIF3BP55884 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.01□□□□□ -2.09
EIF3BP55884 MIR4298-201ENST00000584380 73 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 AC008749.1-201ENST00000597650 306 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.15-201ENST00000611544 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.16-201ENST00000613119 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.12-201ENST00000613778 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.20-201ENST00000613956 192 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.9-201ENST00000615427 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.11-201ENST00000616345 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.2-201ENST00000616535 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.3-201ENST00000617785 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.19-201ENST00000618602 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 RNU2-1-201ENST00000618664 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.6-201ENST00000619225 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.5-201ENST00000619465 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 U2.10-201ENST00000620268 191 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 AC091925.1-201ENST00000623204 462 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.01□□□□□ -2.09
EIF3BP55884 MIR4272-201ENST00000635924 64 ntBASIC2.01□□□□□ -2.09
EIF3BP55884 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
EIF3BP55884 Y_RNA.39-201ENST00000362620 98 ntBASIC2□□□□□ -2.09
EIF3BP55884 RNU6-1240P-201ENST00000365155 104 ntBASIC2□□□□□ -2.09
EIF3BP55884 RNU6-1264P-201ENST00000383891 107 ntBASIC2□□□□□ -2.09
EIF3BP55884 SNORA8-201ENST00000384574 139 ntBASIC2□□□□□ -2.09
EIF3BP55884 RNU6-417P-201ENST00000384712 107 ntBASIC2□□□□□ -2.09
EIF3BP55884 RNU6-308P-201ENST00000390957 107 ntBASIC2□□□□□ -2.09
EIF3BP55884 AL117342.1-201ENST00000404861 406 ntBASIC2□□□□□ -2.09
EIF3BP55884 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2□□□□□ -2.09
EIF3BP55884 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2□□□□□ -2.09
EIF3BP55884 AC007677.1-201ENST00000445757 515 ntBASIC2□□□□□ -2.09
EIF3BP55884 TRAPPC2P7-201ENST00000509650 231 ntBASIC2□□□□□ -2.09
EIF3BP55884 MIR4299-201ENST00000577899 72 ntBASIC2□□□□□ -2.09
EIF3BP55884 MIR5089-201ENST00000580047 84 ntBASIC2□□□□□ -2.09
EIF3BP55884 VN1R91P-201ENST00000594377 169 ntBASIC2□□□□□ -2.09
EIF3BP55884 AL627230.6-201ENST00000611129 280 ntBASIC2□□□□□ -2.09
EIF3BP55884 AC006157.1-201ENST00000611750 366 ntBASIC2□□□□□ -2.09
EIF3BP55884 AL773524.1-201ENST00000614065 229 ntBASIC2□□□□□ -2.09
EIF3BP55884 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2□□□□□ -2.09
EIF3BP55884 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 264 ms