Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC097473.1-201ENST00000508142 408 ntBASIC1.58□□□□□ -2.16
VCPP55072 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.58□□□□□ -2.16
VCPP55072 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.58□□□□□ -2.16
VCPP55072 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.58□□□□□ -2.16
VCPP55072 AC018462.2-201ENST00000605375 395 ntBASIC1.58□□□□□ -2.16
VCPP55072 AC083806.3-201ENST00000614016 455 ntBASIC1.58□□□□□ -2.16
VCPP55072 MIR8074-201ENST00000615081 81 ntBASIC1.58□□□□□ -2.16
VCPP55072 ZNF299P-201ENST00000406845 1804 ntBASIC1.58□□□□□ -2.16
VCPP55072 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.58□□□□□ -2.16
VCPP55072 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
VCPP55072 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VCPP55072 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VCPP55072 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.57□□□□□ -2.16
VCPP55072 Y_RNA.160-201ENST00000363677 92 ntBASIC1.57□□□□□ -2.16
VCPP55072 RNU6-595P-201ENST00000363944 107 ntBASIC1.57□□□□□ -2.16
VCPP55072 Y_RNA.339-201ENST00000365325 102 ntBASIC1.57□□□□□ -2.16
VCPP55072 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VCPP55072 RNU6-245P-201ENST00000384020 107 ntBASIC1.57□□□□□ -2.16
VCPP55072 RNU6-17P-201ENST00000384245 107 ntBASIC1.57□□□□□ -2.16
VCPP55072 RNU6-18P-201ENST00000384527 107 ntBASIC1.57□□□□□ -2.16
VCPP55072 RPS3AP52-201ENST00000435639 297 ntBASIC1.57□□□□□ -2.16
VCPP55072 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.57□□□□□ -2.16
VCPP55072 AC114982.1-201ENST00000469402 321 ntBASIC1.57□□□□□ -2.16
VCPP55072 AC026782.1-201ENST00000512952 449 ntBASIC1.57□□□□□ -2.16
VCPP55072 RNU7-175P-201ENST00000515915 61 ntBASIC1.57□□□□□ -2.16
VCPP55072 RNU6-948P-201ENST00000516374 107 ntBASIC1.57□□□□□ -2.16
VCPP55072 RNU2-34P-201ENST00000516534 121 ntBASIC1.57□□□□□ -2.16
VCPP55072 RNU6-344P-201ENST00000516635 111 ntBASIC1.57□□□□□ -2.16
VCPP55072 RNU6-1016P-201ENST00000516689 94 ntBASIC1.57□□□□□ -2.16
VCPP55072 RNU7-30P-201ENST00000516835 62 ntBASIC1.57□□□□□ -2.16
VCPP55072 SNORA31.17-201ENST00000516953 127 ntBASIC1.57□□□□□ -2.16
VCPP55072 RNU6-856P-201ENST00000516959 98 ntBASIC1.57□□□□□ -2.16
VCPP55072 SUMO2P18-201ENST00000518873 252 ntBASIC1.57□□□□□ -2.16
VCPP55072 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.57□□□□□ -2.16
VCPP55072 AL590705.4-201ENST00000532209 134 ntBASIC1.57□□□□□ -2.16
VCPP55072 AC027288.2-201ENST00000553028 243 ntBASIC1.57□□□□□ -2.16
VCPP55072 MIR6078-201ENST00000611069 100 ntBASIC1.57□□□□□ -2.16
VCPP55072 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
VCPP55072 Y_RNA.48-201ENST00000362710 103 ntBASIC1.56□□□□□ -2.16
VCPP55072 RNU6-137P-201ENST00000363680 108 ntBASIC1.56□□□□□ -2.16
VCPP55072 RNU6-1305P-201ENST00000364353 104 ntBASIC1.56□□□□□ -2.16
VCPP55072 RNU6-593P-201ENST00000364716 112 ntBASIC1.56□□□□□ -2.16
VCPP55072 Y_RNA.279-201ENST00000364763 95 ntBASIC1.56□□□□□ -2.16
VCPP55072 RNU6-975P-201ENST00000384296 105 ntBASIC1.56□□□□□ -2.16
VCPP55072 SNORA67.2-201ENST00000384300 149 ntBASIC1.56□□□□□ -2.16
VCPP55072 Y_RNA.473-201ENST00000384333 102 ntBASIC1.56□□□□□ -2.16
VCPP55072 Y_RNA.490-201ENST00000384413 102 ntBASIC1.56□□□□□ -2.16
VCPP55072 RNU6-541P-201ENST00000384709 110 ntBASIC1.56□□□□□ -2.16
VCPP55072 MIR586-201ENST00000385035 97 ntBASIC1.56□□□□□ -2.16
VCPP55072 MT-TL1-201ENST00000386347 75 ntBASIC1.56□□□□□ -2.16
VCPP55072 RNU6-876P-201ENST00000391295 104 ntBASIC1.56□□□□□ -2.16
VCPP55072 RNU6-955P-201ENST00000410497 104 ntBASIC1.56□□□□□ -2.16
VCPP55072 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.56□□□□□ -2.16
VCPP55072 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
VCPP55072 AC107399.1-201ENST00000451226 265 ntBASIC1.56□□□□□ -2.16
VCPP55072 HMGN2P9-201ENST00000476875 229 ntBASIC1.56□□□□□ -2.16
VCPP55072 AC010409.1-201ENST00000487382 476 ntBASIC1.56□□□□□ -2.16
VCPP55072 RNU6-1223P-201ENST00000517124 104 ntBASIC1.56□□□□□ -2.16
VCPP55072 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
VCPP55072 SUB1P4-201ENST00000566062 339 ntBASIC1.56□□□□□ -2.16
VCPP55072 MTND5P10-201ENST00000603719 1809 ntBASIC1.56□□□□□ -2.16
VCPP55072 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
VCPP55072 Y_RNA.30-201ENST00000362572 97 ntBASIC1.55□□□□□ -2.16
VCPP55072 RNU6-845P-201ENST00000362578 103 ntBASIC1.55□□□□□ -2.16
VCPP55072 Y_RNA.405-201ENST00000383979 100 ntBASIC1.55□□□□□ -2.16
VCPP55072 Y_RNA.451-201ENST00000384200 100 ntBASIC1.55□□□□□ -2.16
VCPP55072 Y_RNA.524-201ENST00000384564 100 ntBASIC1.55□□□□□ -2.16
VCPP55072 Y_RNA.561-201ENST00000384694 100 ntBASIC1.55□□□□□ -2.16
VCPP55072 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.55□□□□□ -2.16
VCPP55072 RNU6-159P-201ENST00000391080 106 ntBASIC1.55□□□□□ -2.16
VCPP55072 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
VCPP55072 RNU6-1050P-201ENST00000410388 107 ntBASIC1.55□□□□□ -2.16
VCPP55072 RN7SKP51-201ENST00000410781 304 ntBASIC1.55□□□□□ -2.16
VCPP55072 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.55□□□□□ -2.16
VCPP55072 AC016717.1-201ENST00000448918 286 ntBASIC1.55□□□□□ -2.16
VCPP55072 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
VCPP55072 SNORA25.14-201ENST00000516481 132 ntBASIC1.55□□□□□ -2.16
VCPP55072 CBX3P8-201ENST00000532412 525 ntBASIC1.55□□□□□ -2.16
VCPP55072 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.55□□□□□ -2.16
VCPP55072 AC005668.1-201ENST00000571142 476 ntBASIC1.55□□□□□ -2.16
VCPP55072 MIR5094-201ENST00000578766 85 ntBASIC1.55□□□□□ -2.16
VCPP55072 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.55□□□□□ -2.16
VCPP55072 SNORD114-27-201ENST00000363766 70 ntBASIC1.54□□□□□ -2.16
VCPP55072 RNU6-873P-201ENST00000363833 107 ntBASIC1.54□□□□□ -2.16
VCPP55072 RNU6-1235P-201ENST00000384559 107 ntBASIC1.54□□□□□ -2.16
VCPP55072 Y_RNA.594-201ENST00000410373 140 ntBASIC1.54□□□□□ -2.16
VCPP55072 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.54□□□□□ -2.16
VCPP55072 RPL37P10-201ENST00000412884 288 ntBASIC1.54□□□□□ -2.16
VCPP55072 AC007098.1-201ENST00000420122 367 ntBASIC1.54□□□□□ -2.16
VCPP55072 AC060773.1-201ENST00000421698 310 ntBASIC1.54□□□□□ -2.16
VCPP55072 MTCO3P29-201ENST00000432119 779 ntBASIC1.54□□□□□ -2.16
VCPP55072 AL445305.1-201ENST00000432577 575 ntBASIC1.54□□□□□ -2.16
VCPP55072 AC074290.1-201ENST00000448883 135 ntBASIC1.54□□□□□ -2.16
VCPP55072 RNU6-498P-201ENST00000459468 107 ntBASIC1.54□□□□□ -2.16
VCPP55072 RPL31P58-201ENST00000469001 379 ntBASIC1.54□□□□□ -2.16
VCPP55072 RNU6-1041P-201ENST00000516254 102 ntBASIC1.54□□□□□ -2.16
VCPP55072 Y_RNA.675-201ENST00000516389 149 ntBASIC1.54□□□□□ -2.16
VCPP55072 RNU1-117P-201ENST00000517041 158 ntBASIC1.54□□□□□ -2.16
VCPP55072 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
VCPP55072 AC134698.4-201ENST00000523451 826 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms