Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC136932.1-201ENST00000574771 208 ntBASIC2.36□□□□□ -2.03
PMS2P54278 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.36□□□□□ -2.03
PMS2P54278 TCL6_2.1-201ENST00000615162 119 ntBASIC2.36□□□□□ -2.03
PMS2P54278 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PMS2P54278 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PMS2P54278 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PMS2P54278 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.35□□□□□ -2.03
PMS2P54278 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PMS2P54278 AP006437.1-201ENST00000641440 3685 ntBASIC2.35□□□□□ -2.03
PMS2P54278 Y_RNA.179-201ENST00000363844 90 ntBASIC2.35□□□□□ -2.03
PMS2P54278 RNU6-944P-201ENST00000364023 107 ntBASIC2.35□□□□□ -2.03
PMS2P54278 RNU1-91P-201ENST00000364746 163 ntBASIC2.35□□□□□ -2.03
PMS2P54278 RNU6-793P-201ENST00000384233 104 ntBASIC2.35□□□□□ -2.03
PMS2P54278 RNU1-148P-201ENST00000384472 162 ntBASIC2.35□□□□□ -2.03
PMS2P54278 RNU6-713P-201ENST00000384761 107 ntBASIC2.35□□□□□ -2.03
PMS2P54278 Y_RNA.595-201ENST00000410403 105 ntBASIC2.35□□□□□ -2.03
PMS2P54278 Z98742.3-201ENST00000418637 326 ntBASIC2.35□□□□□ -2.03
PMS2P54278 Y_RNA.683-201ENST00000516508 93 ntBASIC2.35□□□□□ -2.03
PMS2P54278 RNU6-344P-201ENST00000516635 111 ntBASIC2.35□□□□□ -2.03
PMS2P54278 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.35□□□□□ -2.03
PMS2P54278 AC022616.8-201ENST00000533569 253 ntBASIC2.35□□□□□ -2.03
PMS2P54278 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.35□□□□□ -2.03
PMS2P54278 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.35□□□□□ -2.03
PMS2P54278 MIR3126-201ENST00000577443 74 ntBASIC2.35□□□□□ -2.03
PMS2P54278 MIR3671-201ENST00000580455 88 ntBASIC2.35□□□□□ -2.03
PMS2P54278 MIR4423-201ENST00000580922 80 ntBASIC2.35□□□□□ -2.03
PMS2P54278 AC005562.2-201ENST00000618264 111 ntBASIC2.35□□□□□ -2.03
PMS2P54278 MIR6766-201ENST00000622641 72 ntBASIC2.35□□□□□ -2.03
PMS2P54278 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PMS2P54278 MTND5P35-201ENST00000557537 1720 ntBASIC2.34□□□□□ -2.03
PMS2P54278 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
PMS2P54278 Y_RNA.376-201ENST00000365638 108 ntBASIC2.34□□□□□ -2.03
PMS2P54278 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.34□□□□□ -2.03
PMS2P54278 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.34□□□□□ -2.03
PMS2P54278 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.34□□□□□ -2.03
PMS2P54278 AC018868.1-201ENST00000491307 315 ntBASIC2.34□□□□□ -2.03
PMS2P54278 AC090255.1-201ENST00000495779 349 ntBASIC2.34□□□□□ -2.03
PMS2P54278 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.34□□□□□ -2.03
PMS2P54278 IGKV3-31-201ENST00000523109 329 ntBASIC2.34□□□□□ -2.03
PMS2P54278 AP003733.2-201ENST00000529409 171 ntBASIC2.34□□□□□ -2.03
PMS2P54278 AK6P2-201ENST00000549020 471 ntBASIC2.34□□□□□ -2.03
PMS2P54278 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.34□□□□□ -2.03
PMS2P54278 MIR4300-201ENST00000581016 96 ntBASIC2.34□□□□□ -2.03
PMS2P54278 MZT1P2-201ENST00000604387 248 ntBASIC2.34□□□□□ -2.03
PMS2P54278 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.34□□□□□ -2.03
PMS2P54278 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.34□□□□□ -2.03
PMS2P54278 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PMS2P54278 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PMS2P54278 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PMS2P54278 SNORA3A-201ENST00000364113 130 ntBASIC2.33□□□□□ -2.04
PMS2P54278 Y_RNA.230-201ENST00000364348 109 ntBASIC2.33□□□□□ -2.04
PMS2P54278 RNU4-52P-201ENST00000384209 138 ntBASIC2.33□□□□□ -2.04
PMS2P54278 MT-TW-201ENST00000387382 68 ntBASIC2.33□□□□□ -2.04
PMS2P54278 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PMS2P54278 AL355497.1-201ENST00000406262 551 ntBASIC2.33□□□□□ -2.04
PMS2P54278 MIR1294-201ENST00000408503 142 ntBASIC2.33□□□□□ -2.04
PMS2P54278 Y_RNA.618-201ENST00000410949 107 ntBASIC2.33□□□□□ -2.04
PMS2P54278 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.33□□□□□ -2.04
PMS2P54278 AL356320.1-201ENST00000429616 163 ntBASIC2.33□□□□□ -2.04
PMS2P54278 AL445305.1-201ENST00000432577 575 ntBASIC2.33□□□□□ -2.04
PMS2P54278 AC091179.3-201ENST00000474761 144 ntBASIC2.33□□□□□ -2.04
PMS2P54278 RN7SL636P-201ENST00000497504 294 ntBASIC2.33□□□□□ -2.04
PMS2P54278 SNORA40.9-201ENST00000515895 93 ntBASIC2.33□□□□□ -2.04
PMS2P54278 DEFB131C-201ENST00000528817 165 ntBASIC2.33□□□□□ -2.04
PMS2P54278 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.33□□□□□ -2.04
PMS2P54278 NDUFA5P6-201ENST00000542110 379 ntBASIC2.33□□□□□ -2.04
PMS2P54278 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PMS2P54278 MIR4524B-201ENST00000581569 115 ntBASIC2.33□□□□□ -2.04
PMS2P54278 AC006006.1-201ENST00000603082 144 ntBASIC2.33□□□□□ -2.04
PMS2P54278 AC103810.6-201ENST00000606708 136 ntBASIC2.33□□□□□ -2.04
PMS2P54278 AL357075.2-201ENST00000614906 189 ntBASIC2.33□□□□□ -2.04
PMS2P54278 U6.104-201ENST00000637979 90 ntBASIC2.33□□□□□ -2.04
PMS2P54278 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
PMS2P54278 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.33□□□□□ -2.04
PMS2P54278 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PMS2P54278 MIR410-201ENST00000362222 80 ntBASIC2.32□□□□□ -2.04
PMS2P54278 Y_RNA.143-201ENST00000363520 106 ntBASIC2.32□□□□□ -2.04
PMS2P54278 Y_RNA.396-201ENST00000383949 103 ntBASIC2.32□□□□□ -2.04
PMS2P54278 SNORA67.2-201ENST00000384300 149 ntBASIC2.32□□□□□ -2.04
PMS2P54278 MIR549A-201ENST00000385268 96 ntBASIC2.32□□□□□ -2.04
PMS2P54278 MIR1302-6-201ENST00000408466 90 ntBASIC2.32□□□□□ -2.04
PMS2P54278 RN7SKP223-201ENST00000410582 62 ntBASIC2.32□□□□□ -2.04
PMS2P54278 AC004866.1-201ENST00000411748 78 ntBASIC2.32□□□□□ -2.04
PMS2P54278 ELOCP21-201ENST00000412558 336 ntBASIC2.32□□□□□ -2.04
PMS2P54278 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.32□□□□□ -2.04
PMS2P54278 AC004386.2-201ENST00000441858 148 ntBASIC2.32□□□□□ -2.04
PMS2P54278 AC009237.7-201ENST00000447357 229 ntBASIC2.32□□□□□ -2.04
PMS2P54278 RPS23P5-201ENST00000495419 428 ntBASIC2.32□□□□□ -2.04
PMS2P54278 AC234781.5-201ENST00000508429 271 ntBASIC2.32□□□□□ -2.04
PMS2P54278 RNU2-44P-201ENST00000516795 194 ntBASIC2.32□□□□□ -2.04
PMS2P54278 RNU6-667P-201ENST00000517186 102 ntBASIC2.32□□□□□ -2.04
PMS2P54278 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.32□□□□□ -2.04
PMS2P54278 AC021269.2-201ENST00000532318 330 ntBASIC2.32□□□□□ -2.04
PMS2P54278 AC026271.5-201ENST00000577873 130 ntBASIC2.32□□□□□ -2.04
PMS2P54278 AC062037.2-201ENST00000610137 73 ntBASIC2.32□□□□□ -2.04
PMS2P54278 AC011476.5-201ENST00000615594 130 ntBASIC2.32□□□□□ -2.04
PMS2P54278 MIR376A1-201ENST00000616574 68 ntBASIC2.32□□□□□ -2.04
PMS2P54278 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.32□□□□□ -2.04
PMS2P54278 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PMS2P54278 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 1175.5 ms