Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SNORA8.3-201ENST00000384679 139 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 RNU6-550P-201ENST00000391057 101 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 AL117339.3-201ENST00000418733 162 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 AC005002.2-201ENST00000438228 269 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.01□□□□□ -2.41
NUP98P52948 AL031274.1-201ENST00000450334 232 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 TPT1P7-201ENST00000458300 517 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 MTCO2P6-201ENST00000463134 685 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 RNU6-344P-201ENST00000516635 111 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 RNA5SP54-201ENST00000516951 92 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 AC023827.1-201ENST00000569247 97 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 FGF7P1-201ENST00000582820 288 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 AC091178.2-201ENST00000584401 117 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 AC131055.1-201ENST00000584626 316 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC-0.01□□□□□ -2.41
NUP98P52948 SNORD44.1-201ENST00000363202 61 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 RNA5SP214-201ENST00000363378 118 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.01□□□□□ -2.41
NUP98P52948 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.01□□□□□ -2.41
NUP98P52948 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.01□□□□□ -2.41
NUP98P52948 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 RNU7-28P-201ENST00000516759 62 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.01□□□□□ -2.41
NUP98P52948 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.01□□□□□ -2.41
NUP98P52948 MIR4493-201ENST00000584016 73 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 AC234772.3-201ENST00000602277 528 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 AL096861.1-201ENST00000610899 123 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 Pinc.1-201ENST00000616452 154 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 AL078596.1-201ENST00000624856 447 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 AC019226.2-201ENST00000625973 424 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 OR5AK4P-201ENST00000635912 903 ntBASIC-0.01□□□□□ -2.41
NUP98P52948 SNORA12.1-201ENST00000390873 148 ntBASIC-0.02□□□□□ -2.41
NUP98P52948 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.02□□□□□ -2.41
NUP98P52948 AC004866.1-201ENST00000411748 78 ntBASIC-0.02□□□□□ -2.41
NUP98P52948 AC008134.1-201ENST00000420943 193 ntBASIC-0.02□□□□□ -2.41
NUP98P52948 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.02□□□□□ -2.41
NUP98P52948 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.02□□□□□ -2.41
NUP98P52948 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.02□□□□□ -2.41
NUP98P52948 MIRLET7D-201ENST00000362263 87 ntBASIC-0.03□□□□□ -2.41
NUP98P52948 RNA5SP482-201ENST00000391269 118 ntBASIC-0.03□□□□□ -2.41
NUP98P52948 MIR1185-2-201ENST00000408687 86 ntBASIC-0.03□□□□□ -2.41
NUP98P52948 MTCO2P3-201ENST00000442543 421 ntBASIC-0.03□□□□□ -2.41
NUP98P52948 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.03□□□□□ -2.41
NUP98P52948 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.03□□□□□ -2.41
NUP98P52948 SNORA14.1-201ENST00000516113 141 ntBASIC-0.03□□□□□ -2.41
NUP98P52948 AP003716.2-201ENST00000528260 108 ntBASIC-0.03□□□□□ -2.41
NUP98P52948 RAC1P9-201ENST00000604990 392 ntBASIC-0.03□□□□□ -2.41
NUP98P52948 RNU6-245P-201ENST00000384020 107 ntBASIC-0.03□□□□□ -2.42
NUP98P52948 DAP3P1-201ENST00000441522 278 ntBASIC-0.03□□□□□ -2.42
NUP98P52948 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.03□□□□□ -2.42
NUP98P52948 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.03□□□□□ -2.42
NUP98P52948 AC091133.4-201ENST00000511142 308 ntBASIC-0.03□□□□□ -2.42
NUP98P52948 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.03□□□□□ -2.42
NUP98P52948 IGLVI-20-201ENST00000519296 130 ntBASIC-0.03□□□□□ -2.42
NUP98P52948 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.03□□□□□ -2.42
NUP98P52948 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.03□□□□□ -2.42
NUP98P52948 AC025449.1-201ENST00000603896 529 ntBASIC-0.03□□□□□ -2.42
NUP98P52948 AC108676.2-201ENST00000605225 163 ntBASIC-0.03□□□□□ -2.42
NUP98P52948 AC092634.7-201ENST00000621022 103 ntBASIC-0.03□□□□□ -2.42
NUP98P52948 AP000568.1-201ENST00000282964 442 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 SNORD114-31-201ENST00000363219 75 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 SNORD114-9-201ENST00000364370 72 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 SNORA20.2-201ENST00000383922 131 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 RNU6-177P-201ENST00000411257 104 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 Z98949.2-201ENST00000440996 144 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.04□□□□□ -2.42
NUP98P52948 SNRPGP12-201ENST00000449481 213 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 ELOCP24-201ENST00000456370 334 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 RNU7-182P-201ENST00000459009 62 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 SNORD65B-201ENST00000459126 73 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 RNU6-863P-201ENST00000515989 104 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 RNU6-323P-201ENST00000521915 107 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 AL133173.2-201ENST00000614270 90 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 AC137590.2-201ENST00000619709 240 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 SEPT14P19-203ENST00000633205 211 ntBASIC-0.04□□□□□ -2.42
NUP98P52948 MIR1-1-201ENST00000362147 71 ntBASIC-0.05□□□□□ -2.42
NUP98P52948 SNORD95.1-201ENST00000364099 68 ntBASIC-0.05□□□□□ -2.42
NUP98P52948 SNORD70.1-201ENST00000391007 85 ntBASIC-0.05□□□□□ -2.42
NUP98P52948 AL663109.1-201ENST00000411498 844 ntBASIC-0.05□□□□□ -2.42
NUP98P52948 RPS26P42-201ENST00000413485 326 ntBASIC-0.05□□□□□ -2.42
NUP98P52948 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.05□□□□□ -2.42
NUP98P52948 AL512286.1-201ENST00000439244 400 ntBASIC-0.05□□□□□ -2.42
NUP98P52948 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.05□□□□□ -2.42
NUP98P52948 RN7SKP12-201ENST00000516275 143 ntBASIC-0.05□□□□□ -2.42
NUP98P52948 AC022616.3-201ENST00000523940 148 ntBASIC-0.05□□□□□ -2.42
NUP98P52948 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.05□□□□□ -2.42
NUP98P52948 MIR4438-201ENST00000585271 93 ntBASIC-0.05□□□□□ -2.42
NUP98P52948 AL117336.2-201ENST00000602435 335 ntBASIC-0.05□□□□□ -2.42
NUP98P52948 SNORA25.3-201ENST00000363205 127 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 RNU6-108P-201ENST00000365558 107 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 RNU6-541P-201ENST00000384709 110 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 RNU6-994P-201ENST00000410507 111 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 MTCO2P34-201ENST00000421994 607 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 EPS15P1-201ENST00000448836 336 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 RPL23AP54-201ENST00000495129 419 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.06□□□□□ -2.42
NUP98P52948 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.06□□□□□ -2.42
NUP98P52948 MIR4999-201ENST00000585029 91 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms