Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL355375.2-201ENST00000574825 175 ntBASIC1.8□□□□□ -2.12
LHX1P48742 MIR5094-201ENST00000578766 85 ntBASIC1.8□□□□□ -2.12
LHX1P48742 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.8□□□□□ -2.12
LHX1P48742 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
LHX1P48742 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.8□□□□□ -2.12
LHX1P48742 AC006001.4-201ENST00000622243 395 ntBASIC1.8□□□□□ -2.12
LHX1P48742 snoZ196.1-201ENST00000625269 89 ntBASIC1.8□□□□□ -2.12
LHX1P48742 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.8□□□□□ -2.12
LHX1P48742 MTND4LP32-201ENST00000636111 270 ntBASIC1.8□□□□□ -2.12
LHX1P48742 MTND5P35-201ENST00000557537 1720 ntBASIC1.8□□□□□ -2.12
LHX1P48742 Y_RNA.70-201ENST00000362886 110 ntBASIC1.79□□□□□ -2.12
LHX1P48742 U3.8-201ENST00000363675 217 ntBASIC1.79□□□□□ -2.12
LHX1P48742 Y_RNA.358-201ENST00000365491 99 ntBASIC1.79□□□□□ -2.12
LHX1P48742 Y_RNA.529-201ENST00000384586 119 ntBASIC1.79□□□□□ -2.12
LHX1P48742 Y_RNA.557-201ENST00000384680 107 ntBASIC1.79□□□□□ -2.12
LHX1P48742 RNA5SP213-201ENST00000391031 106 ntBASIC1.79□□□□□ -2.12
LHX1P48742 MIR2053-201ENST00000459295 91 ntBASIC1.79□□□□□ -2.12
LHX1P48742 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.79□□□□□ -2.12
LHX1P48742 FGF7P4-201ENST00000509595 295 ntBASIC1.79□□□□□ -2.12
LHX1P48742 RNU6-120P-201ENST00000516077 103 ntBASIC1.79□□□□□ -2.12
LHX1P48742 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
LHX1P48742 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LHX1P48742 RNU6-862P-201ENST00000362804 105 ntBASIC1.78□□□□□ -2.12
LHX1P48742 RNA5SP99-201ENST00000364020 114 ntBASIC1.78□□□□□ -2.12
LHX1P48742 Y_RNA.577-201ENST00000384794 101 ntBASIC1.78□□□□□ -2.12
LHX1P48742 MIR625-201ENST00000385047 85 ntBASIC1.78□□□□□ -2.12
LHX1P48742 MIR548B-201ENST00000385247 97 ntBASIC1.78□□□□□ -2.12
LHX1P48742 RNY4P36-201ENST00000391116 96 ntBASIC1.78□□□□□ -2.12
LHX1P48742 RNU6-1001P-201ENST00000411265 100 ntBASIC1.78□□□□□ -2.12
LHX1P48742 MTND4LP11-201ENST00000422184 280 ntBASIC1.78□□□□□ -2.12
LHX1P48742 NDUFB4P10-201ENST00000452541 359 ntBASIC1.78□□□□□ -2.12
LHX1P48742 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.78□□□□□ -2.12
LHX1P48742 AC022868.1-201ENST00000517767 391 ntBASIC1.78□□□□□ -2.12
LHX1P48742 SUB1P3-201ENST00000564581 315 ntBASIC1.78□□□□□ -2.12
LHX1P48742 AC125232.2-201ENST00000592457 143 ntBASIC1.78□□□□□ -2.12
LHX1P48742 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.78□□□□□ -2.12
LHX1P48742 RNA5SP432-201ENST00000362480 116 ntBASIC1.77□□□□□ -2.13
LHX1P48742 RNU6-879P-201ENST00000364328 108 ntBASIC1.77□□□□□ -2.13
LHX1P48742 SNORD116-29-201ENST00000384516 83 ntBASIC1.77□□□□□ -2.13
LHX1P48742 MIR676-201ENST00000390702 67 ntBASIC1.77□□□□□ -2.13
LHX1P48742 MTCO2P27-201ENST00000420740 428 ntBASIC1.77□□□□□ -2.13
LHX1P48742 AC008134.1-201ENST00000420943 193 ntBASIC1.77□□□□□ -2.13
LHX1P48742 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.77□□□□□ -2.13
LHX1P48742 AC099677.2-201ENST00000436385 175 ntBASIC1.77□□□□□ -2.13
LHX1P48742 MTATP6P23-201ENST00000440153 476 ntBASIC1.77□□□□□ -2.13
LHX1P48742 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
LHX1P48742 RNU6-221P-201ENST00000459541 99 ntBASIC1.77□□□□□ -2.13
LHX1P48742 MRPS17P9-201ENST00000511924 393 ntBASIC1.77□□□□□ -2.13
LHX1P48742 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.77□□□□□ -2.13
LHX1P48742 RNU6-470P-201ENST00000515954 104 ntBASIC1.77□□□□□ -2.13
LHX1P48742 Y_RNA.718-201ENST00000517110 102 ntBASIC1.77□□□□□ -2.13
LHX1P48742 SUB1P4-201ENST00000566062 339 ntBASIC1.77□□□□□ -2.13
LHX1P48742 AC069114.2-201ENST00000604699 304 ntBASIC1.77□□□□□ -2.13
LHX1P48742 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.77□□□□□ -2.13
LHX1P48742 AL353149.1-201ENST00000610667 244 ntBASIC1.77□□□□□ -2.13
LHX1P48742 Y_RNA.804-201ENST00000615262 101 ntBASIC1.77□□□□□ -2.13
LHX1P48742 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
LHX1P48742 RNU1-96P-201ENST00000364163 162 ntBASIC1.76□□□□□ -2.13
LHX1P48742 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
LHX1P48742 SNORA67.5-201ENST00000391036 107 ntBASIC1.76□□□□□ -2.13
LHX1P48742 MIR1253-201ENST00000408273 105 ntBASIC1.76□□□□□ -2.13
LHX1P48742 MIR1185-2-201ENST00000408687 86 ntBASIC1.76□□□□□ -2.13
LHX1P48742 RNU6-1156P-201ENST00000410365 100 ntBASIC1.76□□□□□ -2.13
LHX1P48742 Y_RNA.595-201ENST00000410403 105 ntBASIC1.76□□□□□ -2.13
LHX1P48742 RNA5SP100-201ENST00000410903 110 ntBASIC1.76□□□□□ -2.13
LHX1P48742 RNA5SP59-201ENST00000410922 110 ntBASIC1.76□□□□□ -2.13
LHX1P48742 AC009310.1-201ENST00000414414 451 ntBASIC1.76□□□□□ -2.13
LHX1P48742 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.76□□□□□ -2.13
LHX1P48742 ELOCP24-201ENST00000456370 334 ntBASIC1.76□□□□□ -2.13
LHX1P48742 U8.22-201ENST00000459141 133 ntBASIC1.76□□□□□ -2.13
LHX1P48742 Y_RNA.632-201ENST00000459189 102 ntBASIC1.76□□□□□ -2.13
LHX1P48742 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.76□□□□□ -2.13
LHX1P48742 RNU6-1146P-201ENST00000516282 102 ntBASIC1.76□□□□□ -2.13
LHX1P48742 RNU6-107P-201ENST00000516643 102 ntBASIC1.76□□□□□ -2.13
LHX1P48742 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.76□□□□□ -2.13
LHX1P48742 CBX3P4-201ENST00000538909 354 ntBASIC1.76□□□□□ -2.13
LHX1P48742 AK6P2-201ENST00000549020 471 ntBASIC1.76□□□□□ -2.13
LHX1P48742 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.76□□□□□ -2.13
LHX1P48742 AL096840.1-201ENST00000603287 93 ntBASIC1.76□□□□□ -2.13
LHX1P48742 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.76□□□□□ -2.13
LHX1P48742 AC126177.8-201ENST00000618339 1015 ntBASIC1.76□□□□□ -2.13
LHX1P48742 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.76□□□□□ -2.13
LHX1P48742 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
LHX1P48742 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
LHX1P48742 snoU2-30.2-201ENST00000362805 70 ntBASIC1.75□□□□□ -2.13
LHX1P48742 Y_RNA.67-201ENST00000362870 100 ntBASIC1.75□□□□□ -2.13
LHX1P48742 MIR329-1-201ENST00000385028 80 ntBASIC1.75□□□□□ -2.13
LHX1P48742 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
LHX1P48742 AC114482.1-201ENST00000418010 247 ntBASIC1.75□□□□□ -2.13
LHX1P48742 HMGN2P34-201ENST00000437647 269 ntBASIC1.75□□□□□ -2.13
LHX1P48742 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.75□□□□□ -2.13
LHX1P48742 HMGB3P17-201ENST00000504195 649 ntBASIC1.75□□□□□ -2.13
LHX1P48742 AC025647.1-201ENST00000517879 253 ntBASIC1.75□□□□□ -2.13
LHX1P48742 CYCSP23-201ENST00000519781 313 ntBASIC1.75□□□□□ -2.13
LHX1P48742 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.75□□□□□ -2.13
LHX1P48742 MIR4713-201ENST00000582691 75 ntBASIC1.75□□□□□ -2.13
LHX1P48742 AC080078.3-201ENST00000605407 463 ntBASIC1.75□□□□□ -2.13
LHX1P48742 AC084781.2-201ENST00000615568 161 ntBASIC1.75□□□□□ -2.13
LHX1P48742 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.75□□□□□ -2.13
LHX1P48742 MIR338-201ENST00000636369 67 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms