Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MTND4P7-201ENST00000523876 130 ntBASIC0.29□□□□□ -2.36
RPL28P46779 AC104576.1-201ENST00000524225 88 ntBASIC0.29□□□□□ -2.36
RPL28P46779 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.29□□□□□ -2.36
RPL28P46779 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.29□□□□□ -2.36
RPL28P46779 CPDP1-201ENST00000579660 283 ntBASIC0.29□□□□□ -2.36
RPL28P46779 MIR4438-201ENST00000585271 93 ntBASIC0.29□□□□□ -2.36
RPL28P46779 AC004223.2-201ENST00000590309 544 ntBASIC0.29□□□□□ -2.36
RPL28P46779 AL117336.2-201ENST00000602435 335 ntBASIC0.29□□□□□ -2.36
RPL28P46779 MIR8076-201ENST00000611401 83 ntBASIC0.29□□□□□ -2.36
RPL28P46779 AC242852.1-201ENST00000612151 96 ntBASIC0.29□□□□□ -2.36
RPL28P46779 MIR6734-201ENST00000621166 68 ntBASIC0.29□□□□□ -2.36
RPL28P46779 AC244015.1-201ENST00000622301 99 ntBASIC0.29□□□□□ -2.36
RPL28P46779 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.29□□□□□ -2.36
RPL28P46779 MIR6079-201ENST00000635807 62 ntBASIC0.29□□□□□ -2.36
RPL28P46779 FGF7P2-201ENST00000332473 296 ntBASIC0.28□□□□□ -2.36
RPL28P46779 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
RPL28P46779 Y_RNA.100-201ENST00000363141 102 ntBASIC0.28□□□□□ -2.36
RPL28P46779 Y_RNA.265-201ENST00000364677 108 ntBASIC0.28□□□□□ -2.36
RPL28P46779 MTATP6P18-201ENST00000417994 673 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC244023.1-201ENST00000426884 112 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC092423.1-201ENST00000430165 186 ntBASIC0.28□□□□□ -2.36
RPL28P46779 MTCO2P11-201ENST00000431069 680 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC092628.1-201ENST00000436250 252 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC104332.1-201ENST00000440471 797 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC073415.1-201ENST00000449240 153 ntBASIC0.28□□□□□ -2.36
RPL28P46779 MTND2P39-201ENST00000457230 764 ntBASIC0.28□□□□□ -2.36
RPL28P46779 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.28□□□□□ -2.36
RPL28P46779 RNU7-12P-201ENST00000516030 62 ntBASIC0.28□□□□□ -2.36
RPL28P46779 SNORD111.1-201ENST00000516421 86 ntBASIC0.28□□□□□ -2.36
RPL28P46779 RNU6-229P-201ENST00000516614 102 ntBASIC0.28□□□□□ -2.36
RPL28P46779 RNU6-232P-201ENST00000517144 64 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.28□□□□□ -2.36
RPL28P46779 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.28□□□□□ -2.36
RPL28P46779 MIR3192-201ENST00000584920 77 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC242498.1-201ENST00000604134 111 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC008536.2-201ENST00000607284 349 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC016597.2-201ENST00000613256 341 ntBASIC0.28□□□□□ -2.36
RPL28P46779 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
RPL28P46779 AC243994.1-201ENST00000618627 109 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC103705.1-201ENST00000619013 241 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC006435.5-201ENST00000624486 112 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC005609.4-201ENST00000625071 447 ntBASIC0.28□□□□□ -2.36
RPL28P46779 AC027514.1-201ENST00000588561 1603 ntBASIC0.27□□□□□ -2.37
RPL28P46779 MIRLET7C-201ENST00000362160 84 ntBASIC0.27□□□□□ -2.37
RPL28P46779 RNA5SP264-201ENST00000363115 107 ntBASIC0.27□□□□□ -2.37
RPL28P46779 Y_RNA.159-201ENST00000363674 87 ntBASIC0.27□□□□□ -2.37
RPL28P46779 RNU6-137P-201ENST00000363680 108 ntBASIC0.27□□□□□ -2.37
RPL28P46779 SNORD87-201ENST00000364849 89 ntBASIC0.27□□□□□ -2.37
RPL28P46779 RNU6-42P-201ENST00000384165 107 ntBASIC0.27□□□□□ -2.37
RPL28P46779 SNORD89-201ENST00000390981 114 ntBASIC0.27□□□□□ -2.37
RPL28P46779 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.27□□□□□ -2.37
RPL28P46779 RPL23AP50-201ENST00000434149 455 ntBASIC0.27□□□□□ -2.37
RPL28P46779 RNU7-125P-201ENST00000458760 62 ntBASIC0.27□□□□□ -2.37
RPL28P46779 SNORD65B-201ENST00000459126 73 ntBASIC0.27□□□□□ -2.37
RPL28P46779 MTCO3P38-201ENST00000468910 766 ntBASIC0.27□□□□□ -2.37
RPL28P46779 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.27□□□□□ -2.37
RPL28P46779 RNU6-189P-201ENST00000516120 101 ntBASIC0.27□□□□□ -2.37
RPL28P46779 MTND4LP26-201ENST00000518144 282 ntBASIC0.27□□□□□ -2.37
RPL28P46779 AP003716.2-201ENST00000528260 108 ntBASIC0.27□□□□□ -2.37
RPL28P46779 AC009094.1-201ENST00000564443 426 ntBASIC0.27□□□□□ -2.37
RPL28P46779 AC131055.1-201ENST00000584626 316 ntBASIC0.27□□□□□ -2.37
RPL28P46779 AC245884.10-201ENST00000597355 337 ntBASIC0.27□□□□□ -2.37
RPL28P46779 AC234772.3-201ENST00000602277 528 ntBASIC0.27□□□□□ -2.37
RPL28P46779 AF246928.1-201ENST00000623768 87 ntBASIC0.27□□□□□ -2.37
RPL28P46779 AL390237.1-201ENST00000404226 1415 ntBASIC0.27□□□□□ -2.37
RPL28P46779 RNU6-996P-201ENST00000365438 107 ntBASIC0.26□□□□□ -2.37
RPL28P46779 RNU6-1237P-201ENST00000384777 107 ntBASIC0.26□□□□□ -2.37
RPL28P46779 MIR526A1-201ENST00000384897 85 ntBASIC0.26□□□□□ -2.37
RPL28P46779 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.26□□□□□ -2.37
RPL28P46779 RNU6-325P-201ENST00000411132 105 ntBASIC0.26□□□□□ -2.37
RPL28P46779 RNA5SP247-201ENST00000411181 105 ntBASIC0.26□□□□□ -2.37
RPL28P46779 AL663109.1-201ENST00000411498 844 ntBASIC0.26□□□□□ -2.37
RPL28P46779 AL162725.1-201ENST00000435405 301 ntBASIC0.26□□□□□ -2.37
RPL28P46779 MTCO2P18-201ENST00000457151 658 ntBASIC0.26□□□□□ -2.37
RPL28P46779 RNU7-63P-201ENST00000459054 62 ntBASIC0.26□□□□□ -2.37
RPL28P46779 RN7SKP12-201ENST00000516275 143 ntBASIC0.26□□□□□ -2.37
RPL28P46779 RNU6-1110P-201ENST00000516462 101 ntBASIC0.26□□□□□ -2.37
RPL28P46779 RNU6-759P-201ENST00000516740 103 ntBASIC0.26□□□□□ -2.37
RPL28P46779 RNU6-58P-201ENST00000517143 103 ntBASIC0.26□□□□□ -2.37
RPL28P46779 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.26□□□□□ -2.37
RPL28P46779 AC109810.1-201ENST00000534066 224 ntBASIC0.26□□□□□ -2.37
RPL28P46779 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.26□□□□□ -2.37
RPL28P46779 AL157687.1-201ENST00000554853 619 ntBASIC0.26□□□□□ -2.37
RPL28P46779 AC017083.3-201ENST00000609955 700 ntBASIC0.26□□□□□ -2.37
RPL28P46779 AC122133.1-201ENST00000613964 233 ntBASIC0.26□□□□□ -2.37
RPL28P46779 AC093913.1-201ENST00000614178 329 ntBASIC0.26□□□□□ -2.37
RPL28P46779 SEPT14P17-201ENST00000617978 177 ntBASIC0.26□□□□□ -2.37
RPL28P46779 MIR6513-201ENST00000621188 64 ntBASIC0.26□□□□□ -2.37
RPL28P46779 AC243829.3-201ENST00000622177 108 ntBASIC0.26□□□□□ -2.37
RPL28P46779 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.26□□□□□ -2.37
RPL28P46779 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
RPL28P46779 RNU6-82P-201ENST00000363970 107 ntBASIC0.25□□□□□ -2.37
RPL28P46779 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
RPL28P46779 RNU1-119P-201ENST00000391122 165 ntBASIC0.25□□□□□ -2.37
RPL28P46779 AL606923.1-201ENST00000406616 190 ntBASIC0.25□□□□□ -2.37
RPL28P46779 AC244098.3-201ENST00000424803 96 ntBASIC0.25□□□□□ -2.37
RPL28P46779 MTCYBP10-201ENST00000424905 650 ntBASIC0.25□□□□□ -2.37
RPL28P46779 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.25□□□□□ -2.37
RPL28P46779 AL359672.1-201ENST00000442302 409 ntBASIC0.25□□□□□ -2.37
RPL28P46779 AC093019.1-201ENST00000443135 252 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms