Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL357075.2-201ENST00000614906 189 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.23□□□□□ -2.05
PTPN9P43378 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.22□□□□□ -2.05
PTPN9P43378 Y_RNA.276-201ENST00000364732 109 ntBASIC2.22□□□□□ -2.05
PTPN9P43378 RNU6-738P-201ENST00000384531 106 ntBASIC2.22□□□□□ -2.05
PTPN9P43378 MIR606-201ENST00000384851 96 ntBASIC2.22□□□□□ -2.05
PTPN9P43378 SNORA3.2-201ENST00000408221 125 ntBASIC2.22□□□□□ -2.05
PTPN9P43378 MIR1262-201ENST00000408276 93 ntBASIC2.22□□□□□ -2.05
PTPN9P43378 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
PTPN9P43378 RPEP5-201ENST00000441137 268 ntBASIC2.22□□□□□ -2.05
PTPN9P43378 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.22□□□□□ -2.05
PTPN9P43378 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.22□□□□□ -2.05
PTPN9P43378 RNU6-764P-201ENST00000516396 105 ntBASIC2.22□□□□□ -2.05
PTPN9P43378 AK6P2-201ENST00000549020 471 ntBASIC2.22□□□□□ -2.05
PTPN9P43378 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.22□□□□□ -2.05
PTPN9P43378 Y_RNA.772-201ENST00000606692 102 ntBASIC2.22□□□□□ -2.05
PTPN9P43378 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.22□□□□□ -2.05
PTPN9P43378 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.22□□□□□ -2.05
PTPN9P43378 AL596028.1-201ENST00000326971 197 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 Y_RNA.145-201ENST00000363527 102 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 RNU6-1310P-201ENST00000384153 107 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 RNU6-160P-201ENST00000384591 107 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 SNORA11.4-201ENST00000408823 129 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 RNA5SP425-201ENST00000410336 112 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 Z98742.3-201ENST00000418637 326 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 AC073910.1-201ENST00000445047 438 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PTPN9P43378 RNU6-625P-201ENST00000459412 107 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 AC010531.2-201ENST00000465012 153 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.21□□□□□ -2.06
PTPN9P43378 RNU6-1137P-201ENST00000517073 99 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.21□□□□□ -2.06
PTPN9P43378 MIR3684-201ENST00000579779 74 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.21□□□□□ -2.06
PTPN9P43378 SNORD14A-201ENST00000606526 91 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.21□□□□□ -2.06
PTPN9P43378 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.21□□□□□ -2.06
PTPN9P43378 MIR6873-201ENST00000622788 63 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 snoZ196.1-201ENST00000625269 89 ntBASIC2.21□□□□□ -2.06
PTPN9P43378 LINC02555-201ENST00000563933 1951 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 MIR340-201ENST00000362125 95 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 Y_RNA.152-201ENST00000363578 100 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 Y_RNA.230-201ENST00000364348 109 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 SNORA63C-201ENST00000364578 129 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 SNORD87-201ENST00000364849 89 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 RNA5SP126-201ENST00000365092 109 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 Y_RNA.462-201ENST00000384268 102 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 Y_RNA.471-201ENST00000384312 102 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 Y_RNA.498-201ENST00000384460 102 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 MIR1185-2-201ENST00000408687 86 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 RN7SKP223-201ENST00000410582 62 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 RAB28P5-201ENST00000427490 651 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 RNU6-221P-201ENST00000459541 99 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 RNU6-856P-201ENST00000516959 98 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 AC091544.4-201ENST00000555268 342 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.2□□□□□ -2.06
PTPN9P43378 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 AP000553.5-201ENST00000641933 54 ntBASIC2.2□□□□□ -2.06
PTPN9P43378 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PTPN9P43378 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PTPN9P43378 AP006437.1-201ENST00000641440 3685 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 Y_RNA.439-201ENST00000384119 94 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 RNU6-301P-201ENST00000384277 107 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 Y_RNA.527-201ENST00000384573 102 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 MIR548B-201ENST00000385247 97 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 AL355497.1-201ENST00000406262 551 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 RNU7-57P-201ENST00000459540 60 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.19□□□□□ -2.06
PTPN9P43378 MIR4423-201ENST00000580922 80 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 AL031274.2-201ENST00000599419 203 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 AC025754.2-201ENST00000606491 432 ntBASIC2.19□□□□□ -2.06
PTPN9P43378 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.19□□□□□ -2.06
PTPN9P43378 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PTPN9P43378 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
PTPN9P43378 SNORD63-201ENST00000384262 68 ntBASIC2.18□□□□□ -2.06
PTPN9P43378 U3.40-201ENST00000408706 208 ntBASIC2.18□□□□□ -2.06
PTPN9P43378 RN7SKP192-201ENST00000411291 327 ntBASIC2.18□□□□□ -2.06
PTPN9P43378 RNA5SP270-201ENST00000411361 118 ntBASIC2.18□□□□□ -2.06
PTPN9P43378 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.18□□□□□ -2.06
PTPN9P43378 AL390729.2-201ENST00000416137 156 ntBASIC2.18□□□□□ -2.06
PTPN9P43378 AL353689.1-201ENST00000438895 199 ntBASIC2.18□□□□□ -2.06
PTPN9P43378 TRBV12-1-201ENST00000479785 344 ntBASIC2.18□□□□□ -2.06
PTPN9P43378 RNU6-408P-201ENST00000515910 100 ntBASIC2.18□□□□□ -2.06
PTPN9P43378 Y_RNA.720-201ENST00000517166 92 ntBASIC2.18□□□□□ -2.06
PTPN9P43378 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.18□□□□□ -2.06
PTPN9P43378 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.18□□□□□ -2.06
PTPN9P43378 MIR3674-201ENST00000636576 68 ntBASIC2.18□□□□□ -2.06
PTPN9P43378 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PTPN9P43378 AC092881.1-201ENST00000638218 2733 ntBASIC2.18□□□□□ -2.06
PTPN9P43378 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PTPN9P43378 Y_RNA.162-201ENST00000363683 102 ntBASIC2.17□□□□□ -2.06
PTPN9P43378 Y_RNA.183-201ENST00000363882 113 ntBASIC2.17□□□□□ -2.06
PTPN9P43378 RNU6-961P-201ENST00000363893 105 ntBASIC2.17□□□□□ -2.06
PTPN9P43378 SNORA3A-201ENST00000364113 130 ntBASIC2.17□□□□□ -2.06
PTPN9P43378 RNU6-450P-201ENST00000364654 107 ntBASIC2.17□□□□□ -2.06
PTPN9P43378 RNU6-926P-201ENST00000384075 107 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms