Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNU6-1281P-201ENST00000516223 105 ntBASIC1.03□□□□□ -2.24
SSR1P43307 POLR3GP2-201ENST00000588366 668 ntBASIC1.03□□□□□ -2.24
SSR1P43307 AL020996.3-201ENST00000606617 222 ntBASIC1.03□□□□□ -2.24
SSR1P43307 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.03□□□□□ -2.24
SSR1P43307 AC068137.3-201ENST00000639191 341 ntBASIC1.03□□□□□ -2.24
SSR1P43307 RNU6-1090P-201ENST00000364065 94 ntBASIC1.02□□□□□ -2.25
SSR1P43307 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.02□□□□□ -2.25
SSR1P43307 SNORD116-1-201ENST00000384335 95 ntBASIC1.02□□□□□ -2.25
SSR1P43307 MIR515-2-201ENST00000384883 83 ntBASIC1.02□□□□□ -2.25
SSR1P43307 MIR515-1-201ENST00000384884 83 ntBASIC1.02□□□□□ -2.25
SSR1P43307 MIR222-201ENST00000384992 110 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AL355796.1-201ENST00000406706 323 ntBASIC1.02□□□□□ -2.25
SSR1P43307 Y_RNA.595-201ENST00000410403 105 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.02□□□□□ -2.25
SSR1P43307 RNU7-66P-201ENST00000459469 62 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AC048334.1-201ENST00000477975 159 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AC019235.1-201ENST00000503847 207 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AC091144.1-201ENST00000519573 138 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.02□□□□□ -2.25
SSR1P43307 AC024995.1-201ENST00000523014 93 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.02□□□□□ -2.25
SSR1P43307 MIR3672-201ENST00000584290 82 ntBASIC1.02□□□□□ -2.25
SSR1P43307 PIGPP4-201ENST00000584447 307 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AC080078.2-201ENST00000603766 501 ntBASIC1.02□□□□□ -2.25
SSR1P43307 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.02□□□□□ -2.25
SSR1P43307 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AL359757.2-201ENST00000624309 274 ntBASIC1.02□□□□□ -2.25
SSR1P43307 AL359697.1-201ENST00000624879 587 ntBASIC1.02□□□□□ -2.25
SSR1P43307 SNORD3E-202ENST00000627253 216 ntBASIC1.02□□□□□ -2.25
SSR1P43307 RNU1-36P-201ENST00000365130 165 ntBASIC1.01□□□□□ -2.25
SSR1P43307 RNU6-53P-201ENST00000365367 106 ntBASIC1.01□□□□□ -2.25
SSR1P43307 RNU6-332P-201ENST00000391193 108 ntBASIC1.01□□□□□ -2.25
SSR1P43307 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SSR1P43307 MIR320B2-201ENST00000408479 138 ntBASIC1.01□□□□□ -2.25
SSR1P43307 MIR1185-2-201ENST00000408687 86 ntBASIC1.01□□□□□ -2.25
SSR1P43307 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.01□□□□□ -2.25
SSR1P43307 STAG3L5P-204ENST00000443759 179 ntBASIC1.01□□□□□ -2.25
SSR1P43307 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.01□□□□□ -2.25
SSR1P43307 AC093850.1-201ENST00000454121 251 ntBASIC1.01□□□□□ -2.25
SSR1P43307 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.01□□□□□ -2.25
SSR1P43307 RNU6-947P-201ENST00000516264 106 ntBASIC1.01□□□□□ -2.25
SSR1P43307 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.01□□□□□ -2.25
SSR1P43307 snoU13.31-201ENST00000607291 104 ntBASIC1.01□□□□□ -2.25
SSR1P43307 AL138726.1-201ENST00000614873 333 ntBASIC1.01□□□□□ -2.25
SSR1P43307 U6.73-201ENST00000619194 103 ntBASIC1.01□□□□□ -2.25
SSR1P43307 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.01□□□□□ -2.25
SSR1P43307 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SSR1P43307 RNU6-137P-201ENST00000363680 108 ntBASIC1□□□□□ -2.25
SSR1P43307 RNU6-1059P-201ENST00000363752 98 ntBASIC1□□□□□ -2.25
SSR1P43307 RNU4-9P-201ENST00000364951 139 ntBASIC1□□□□□ -2.25
SSR1P43307 Y_RNA.481-201ENST00000384373 102 ntBASIC1□□□□□ -2.25
SSR1P43307 RNU6-541P-201ENST00000384709 110 ntBASIC1□□□□□ -2.25
SSR1P43307 MRPL42P3-201ENST00000401492 326 ntBASIC1□□□□□ -2.25
SSR1P43307 RNU6-908P-201ENST00000410160 94 ntBASIC1□□□□□ -2.25
SSR1P43307 AC008134.1-201ENST00000420943 193 ntBASIC1□□□□□ -2.25
SSR1P43307 NDUFA5P4-201ENST00000436704 385 ntBASIC1□□□□□ -2.25
SSR1P43307 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1□□□□□ -2.25
SSR1P43307 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1□□□□□ -2.25
SSR1P43307 HMGN2P26-201ENST00000463169 339 ntBASIC1□□□□□ -2.25
SSR1P43307 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1□□□□□ -2.25
SSR1P43307 AC107401.1-201ENST00000503426 685 ntBASIC1□□□□□ -2.25
SSR1P43307 SNORA31.2-201ENST00000516019 134 ntBASIC1□□□□□ -2.25
SSR1P43307 SCARNA16.2-201ENST00000516520 172 ntBASIC1□□□□□ -2.25
SSR1P43307 CBX3P8-201ENST00000532412 525 ntBASIC1□□□□□ -2.25
SSR1P43307 MIR3942-201ENST00000585264 109 ntBASIC1□□□□□ -2.25
SSR1P43307 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
SSR1P43307 RNU6-222P-201ENST00000362438 107 ntBASIC0.99□□□□□ -2.25
SSR1P43307 Y_RNA.41-201ENST00000362646 102 ntBASIC0.99□□□□□ -2.25
SSR1P43307 Y_RNA.48-201ENST00000362710 103 ntBASIC0.99□□□□□ -2.25
SSR1P43307 Y_RNA.256-201ENST00000364594 104 ntBASIC0.99□□□□□ -2.25
SSR1P43307 RNU4-75P-201ENST00000364621 146 ntBASIC0.99□□□□□ -2.25
SSR1P43307 RNU6-1042P-201ENST00000384204 107 ntBASIC0.99□□□□□ -2.25
SSR1P43307 Y_RNA.533-201ENST00000384596 114 ntBASIC0.99□□□□□ -2.25
SSR1P43307 MIR146A-201ENST00000385201 99 ntBASIC0.99□□□□□ -2.25
SSR1P43307 RNU6-910P-201ENST00000390844 107 ntBASIC0.99□□□□□ -2.25
SSR1P43307 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.99□□□□□ -2.25
SSR1P43307 RN7SKP200-201ENST00000410564 320 ntBASIC0.99□□□□□ -2.25
SSR1P43307 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.99□□□□□ -2.25
SSR1P43307 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.99□□□□□ -2.25
SSR1P43307 SEPT14P3-201ENST00000439401 183 ntBASIC0.99□□□□□ -2.25
SSR1P43307 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.99□□□□□ -2.25
SSR1P43307 AL732372.2-207ENST00000445840 183 ntBASIC0.99□□□□□ -2.25
SSR1P43307 SEPT14P2-201ENST00000453405 183 ntBASIC0.99□□□□□ -2.25
SSR1P43307 RPL39P38-201ENST00000467018 153 ntBASIC0.99□□□□□ -2.25
SSR1P43307 AP000870.1-201ENST00000472927 406 ntBASIC0.99□□□□□ -2.25
SSR1P43307 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.99□□□□□ -2.25
SSR1P43307 SEPT14P4-201ENST00000513445 186 ntBASIC0.99□□□□□ -2.25
SSR1P43307 FO082796.1-201ENST00000523795 183 ntBASIC0.99□□□□□ -2.25
SSR1P43307 AF250324.2-201ENST00000608299 610 ntBASIC0.99□□□□□ -2.25
SSR1P43307 AC103591.3-201ENST00000608684 209 ntBASIC0.99□□□□□ -2.25
SSR1P43307 Y_RNA.212-201ENST00000364177 102 ntBASIC0.98□□□□□ -2.25
SSR1P43307 Y_RNA.363-201ENST00000365529 113 ntBASIC0.98□□□□□ -2.25
SSR1P43307 CALM2P4-201ENST00000430810 426 ntBASIC0.98□□□□□ -2.25
SSR1P43307 AC092473.1-201ENST00000441098 221 ntBASIC0.98□□□□□ -2.25
SSR1P43307 SNORD65B-201ENST00000459126 73 ntBASIC0.98□□□□□ -2.25
SSR1P43307 SNORD124-201ENST00000459577 104 ntBASIC0.98□□□□□ -2.25
SSR1P43307 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
SSR1P43307 RNU6-107P-201ENST00000516643 102 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms