Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MTND4LP7-201ENST00000431728 294 ntBASIC-0.87□□□□□ -2.55
SNCAP37840 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.87□□□□□ -2.55
SNCAP37840 RPS29P27-201ENST00000463711 170 ntBASIC-0.87□□□□□ -2.55
SNCAP37840 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.87□□□□□ -2.55
SNCAP37840 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.87□□□□□ -2.55
SNCAP37840 AC109479.2-201ENST00000517842 174 ntBASIC-0.87□□□□□ -2.55
SNCAP37840 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.87□□□□□ -2.55
SNCAP37840 AC023050.3-201ENST00000541142 333 ntBASIC-0.87□□□□□ -2.55
SNCAP37840 MIR4432-201ENST00000581823 84 ntBASIC-0.87□□□□□ -2.55
SNCAP37840 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.87□□□□□ -2.55
SNCAP37840 MIR6828-201ENST00000636181 60 ntBASIC-0.87□□□□□ -2.55
SNCAP37840 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
SNCAP37840 AC106754.1-201ENST00000562632 1513 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 MIR101-1-201ENST00000362265 75 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 RNU6-137P-201ENST00000363680 108 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 MIR625-201ENST00000385047 85 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 MTCO1P5-201ENST00000433573 344 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 AC114878.1-201ENST00000441166 358 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 MTND4P19-201ENST00000446659 478 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 USP9YP25-201ENST00000457708 443 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 RNU6-221P-201ENST00000459541 99 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 AC007215.1-201ENST00000464893 276 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 AC010525.2-201ENST00000590920 195 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 AC104260.1-201ENST00000616660 539 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 AC005562.2-201ENST00000618264 111 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 MIR7111-201ENST00000619751 72 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 snoZ196.1-201ENST00000625269 89 ntBASIC-0.88□□□□□ -2.55
SNCAP37840 RNU2-62P-201ENST00000410868 191 ntBASIC-0.89□□□□□ -2.55
SNCAP37840 MTND1P4-201ENST00000435196 415 ntBASIC-0.89□□□□□ -2.55
SNCAP37840 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.89□□□□□ -2.55
SNCAP37840 SNORA14.1-201ENST00000516113 141 ntBASIC-0.89□□□□□ -2.55
SNCAP37840 MIR2115-201ENST00000516657 100 ntBASIC-0.89□□□□□ -2.55
SNCAP37840 AC023442.1-201ENST00000531247 422 ntBASIC-0.89□□□□□ -2.55
SNCAP37840 AC103996.1-201ENST00000555468 102 ntBASIC-0.89□□□□□ -2.55
SNCAP37840 MIR3912-201ENST00000577566 105 ntBASIC-0.89□□□□□ -2.55
SNCAP37840 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.89□□□□□ -2.55
SNCAP37840 AL139286.2-201ENST00000606838 396 ntBASIC-0.89□□□□□ -2.55
SNCAP37840 MIR655-201ENST00000362159 97 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 RNU6-336P-201ENST00000364891 107 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 RNU6-650P-201ENST00000365658 111 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 SNORA67.2-201ENST00000384300 149 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 MIR329-1-201ENST00000385028 80 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 MIR501-201ENST00000390204 84 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 MIR891A-201ENST00000401237 79 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 CALM2P2-201ENST00000428512 440 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 MTND1P32-201ENST00000433043 938 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 SNAP23P1-201ENST00000433229 246 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 AC004386.2-201ENST00000441858 148 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 AC079781.2-201ENST00000446424 169 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.9□□□□□ -2.55
SNCAP37840 AC008628.2-201ENST00000502605 298 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.9□□□□□ -2.55
SNCAP37840 AC026371.1-201ENST00000551867 419 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 AC026470.2-201ENST00000561492 181 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 MIR4752-201ENST00000579672 72 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 MIR4802-201ENST00000581881 80 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 AC006380.1-201ENST00000603598 186 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 AC099785.1-201ENST00000605697 437 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 SNORD38B-202ENST00000625943 69 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 SNORA43.4-201ENST00000629559 138 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 AL162726.3-218ENST00000636401 95 ntBASIC-0.9□□□□□ -2.55
SNCAP37840 MIR377-201ENST00000362145 69 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 RNY3P13-201ENST00000365542 102 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 MIR802-201ENST00000390235 94 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 MIR938-201ENST00000401216 83 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 RNA5SP451-201ENST00000410588 110 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 MLLT10P1-201ENST00000418346 262 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 AC012306.1-201ENST00000423267 114 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.91□□□□□ -2.56
SNCAP37840 PCNPP5-201ENST00000452246 481 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 RNU6-377P-201ENST00000515965 102 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 RNU6-504P-201ENST00000516568 104 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 AC104383.1-201ENST00000530297 370 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 AL596327.1-201ENST00000603629 213 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 AL158032.1-201ENST00000605401 106 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 AL590491.3-201ENST00000610731 82 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 uc_338.28-201ENST00000612082 187 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 RN7SL660P-201ENST00000614852 299 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.91□□□□□ -2.56
SNCAP37840 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.91□□□□□ -2.56
SNCAP37840 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.92□□□□□ -2.56
SNCAP37840 SNORA25.7-201ENST00000364375 127 ntBASIC-0.92□□□□□ -2.56
SNCAP37840 RNA5SP117-201ENST00000365294 118 ntBASIC-0.92□□□□□ -2.56
SNCAP37840 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.92□□□□□ -2.56
SNCAP37840 AL022718.1-201ENST00000412004 84 ntBASIC-0.92□□□□□ -2.56
SNCAP37840 AC098592.1-201ENST00000419352 333 ntBASIC-0.92□□□□□ -2.56
SNCAP37840 BTF3P11-201ENST00000426582 477 ntBASIC-0.92□□□□□ -2.56
SNCAP37840 Z98949.2-201ENST00000440996 144 ntBASIC-0.92□□□□□ -2.56
SNCAP37840 AC009237.7-201ENST00000447357 229 ntBASIC-0.92□□□□□ -2.56
SNCAP37840 RNU7-102P-201ENST00000458948 62 ntBASIC-0.92□□□□□ -2.56
SNCAP37840 RNU7-43P-201ENST00000516554 64 ntBASIC-0.92□□□□□ -2.56
SNCAP37840 RNU2-60P-201ENST00000517290 128 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms