Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.08□□□□□ -2.24
FDFT1P37268 RNU6-506P-201ENST00000516553 94 ntBASIC1.08□□□□□ -2.24
FDFT1P37268 SUMO2P16-201ENST00000519475 264 ntBASIC1.08□□□□□ -2.24
FDFT1P37268 AC027288.2-201ENST00000553028 243 ntBASIC1.08□□□□□ -2.24
FDFT1P37268 MZT1P2-201ENST00000604387 248 ntBASIC1.08□□□□□ -2.24
FDFT1P37268 U3.8-201ENST00000363675 217 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 Y_RNA.212-201ENST00000364177 102 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.07□□□□□ -2.24
FDFT1P37268 Y_RNA.414-201ENST00000384011 101 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
FDFT1P37268 PGBD4P5-201ENST00000445958 426 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 RPS27P1-201ENST00000450552 247 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 RPL30P10-201ENST00000488148 337 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.07□□□□□ -2.24
FDFT1P37268 RNU7-40P-201ENST00000516397 64 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 UBL5P4-201ENST00000562584 236 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 TPRKBP2-201ENST00000565969 475 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
FDFT1P37268 7SK.7-201ENST00000603504 247 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 AF250324.2-201ENST00000608299 610 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 AC021506.2-201ENST00000612354 169 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 AC048344.4-201ENST00000619744 527 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.07□□□□□ -2.24
FDFT1P37268 U6.108-201ENST00000637764 58 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 MTND4P12-201ENST00000498999 1377 ntBASIC1.07□□□□□ -2.24
FDFT1P37268 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
FDFT1P37268 MIR337-201ENST00000362281 93 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 Y_RNA.41-201ENST00000362646 102 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 RNU6-1266P-201ENST00000362794 105 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 Y_RNA.100-201ENST00000363141 102 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 RNU1-22P-201ENST00000363334 158 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 RNU6-280P-201ENST00000364145 104 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 RNU4-75P-201ENST00000364621 146 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 SNORA22-201ENST00000383907 134 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 Y_RNA.415-201ENST00000384012 112 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 SNORA22C-201ENST00000384614 134 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 RNU6-306P-201ENST00000384617 107 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 MIR1185-2-201ENST00000408687 86 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.06□□□□□ -2.24
FDFT1P37268 MTATP6P13-201ENST00000438531 667 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 RN7SKP88-201ENST00000516847 250 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 AL137100.2-201ENST00000555786 315 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 MIR3664-201ENST00000579074 99 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 AC022217.4-201ENST00000604389 163 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 7SK.8-201ENST00000612110 250 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 7SK.11-201ENST00000615477 250 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 AC009248.2-201ENST00000619826 254 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 7SK.13-201ENST00000622040 250 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.06□□□□□ -2.24
FDFT1P37268 AC024614.3-201ENST00000637860 256 ntBASIC1.06□□□□□ -2.24
FDFT1P37268 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
FDFT1P37268 RNY1P10-201ENST00000363268 113 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 Y_RNA.135-201ENST00000363439 95 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 RNU6-137P-201ENST00000363680 108 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 SNORD116-11-201ENST00000383882 92 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 RNU6-1031P-201ENST00000384773 107 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 RNU6-159P-201ENST00000391080 106 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 RN7SKP200-201ENST00000410564 320 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 RNU6-321P-201ENST00000410912 106 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.05□□□□□ -2.24
FDFT1P37268 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.05□□□□□ -2.24
FDFT1P37268 AC091179.3-201ENST00000474761 144 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.05□□□□□ -2.24
FDFT1P37268 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.05□□□□□ -2.24
FDFT1P37268 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.05□□□□□ -2.24
FDFT1P37268 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.05□□□□□ -2.24
FDFT1P37268 SNORD116-28-201ENST00000516123 91 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 Y_RNA.676-201ENST00000516393 96 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 SNORA31.10-201ENST00000516482 106 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 RNU6-273P-201ENST00000516937 96 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.05□□□□□ -2.24
FDFT1P37268 AK6P2-201ENST00000549020 471 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 HSPE1P19-201ENST00000603327 295 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.05□□□□□ -2.24
FDFT1P37268 Y_RNA.4-201ENST00000362333 112 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 RNU6-793P-201ENST00000384233 104 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 RNU6-17P-201ENST00000384245 107 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 RNU6-18P-201ENST00000384527 107 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 AC245047.3-201ENST00000429428 127 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 DLGAP5P1-201ENST00000430307 464 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 MTCO2P7-201ENST00000446518 666 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 Z83846.1-201ENST00000446798 265 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 NDUFB4P10-201ENST00000452541 359 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 TRMT112P2-201ENST00000512910 132 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 AC109635.3-201ENST00000529536 185 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.04□□□□□ -2.24
FDFT1P37268 FRG2DP-202ENST00000566967 323 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 MIR4273-201ENST00000582824 84 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 MIR8054-201ENST00000620877 86 ntBASIC1.04□□□□□ -2.24
FDFT1P37268 AC027335.2-201ENST00000624030 375 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms