Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRT9P35527 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRT9P35527 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.22□□□□□ -2.05
KRT9P35527 Y_RNA.39-201ENST00000362620 98 ntBASIC2.22□□□□□ -2.05
KRT9P35527 RNU6-595P-201ENST00000363944 107 ntBASIC2.22□□□□□ -2.05
KRT9P35527 RNU6-702P-201ENST00000364982 107 ntBASIC2.22□□□□□ -2.05
KRT9P35527 Y_RNA.314-201ENST00000365114 102 ntBASIC2.22□□□□□ -2.05
KRT9P35527 SNORA48.1-201ENST00000390879 135 ntBASIC2.22□□□□□ -2.05
KRT9P35527 RNA5SP425-201ENST00000410336 112 ntBASIC2.22□□□□□ -2.05
KRT9P35527 Y_RNA.618-201ENST00000410949 107 ntBASIC2.22□□□□□ -2.05
KRT9P35527 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.22□□□□□ -2.05
KRT9P35527 AC108059.2-201ENST00000434626 151 ntBASIC2.22□□□□□ -2.05
KRT9P35527 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.22□□□□□ -2.05
KRT9P35527 MRPS35P2-201ENST00000508242 191 ntBASIC2.22□□□□□ -2.05
KRT9P35527 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.22□□□□□ -2.05
KRT9P35527 RNU6-635P-201ENST00000516651 102 ntBASIC2.22□□□□□ -2.05
KRT9P35527 MIR514B-201ENST00000516774 80 ntBASIC2.22□□□□□ -2.05
KRT9P35527 RNU6-58P-201ENST00000517143 103 ntBASIC2.22□□□□□ -2.05
KRT9P35527 RRN3P3-201ENST00000549207 578 ntBASIC2.22□□□□□ -2.05
KRT9P35527 AC027288.2-201ENST00000553028 243 ntBASIC2.22□□□□□ -2.05
KRT9P35527 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.22□□□□□ -2.05
KRT9P35527 HSBP1P1-201ENST00000555205 166 ntBASIC2.22□□□□□ -2.05
KRT9P35527 SUB1P3-201ENST00000564581 315 ntBASIC2.22□□□□□ -2.05
KRT9P35527 MIR1273D-201ENST00000577266 86 ntBASIC2.22□□□□□ -2.05
KRT9P35527 MIR3668-201ENST00000582138 75 ntBASIC2.22□□□□□ -2.05
KRT9P35527 AC005786.1-201ENST00000588553 154 ntBASIC2.22□□□□□ -2.05
KRT9P35527 AL109918.3-201ENST00000603072 338 ntBASIC2.22□□□□□ -2.05
KRT9P35527 AC104695.3-201ENST00000604052 296 ntBASIC2.22□□□□□ -2.05
KRT9P35527 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRT9P35527 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
KRT9P35527 AC091812.1-201ENST00000432235 1948 ntBASIC2.21□□□□□ -2.06
KRT9P35527 RNU6-238P-201ENST00000363313 106 ntBASIC2.21□□□□□ -2.06
KRT9P35527 Y_RNA.152-201ENST00000363578 100 ntBASIC2.21□□□□□ -2.06
KRT9P35527 RNU6-99P-201ENST00000364721 107 ntBASIC2.21□□□□□ -2.06
KRT9P35527 RNU6-17P-201ENST00000384245 107 ntBASIC2.21□□□□□ -2.06
KRT9P35527 RNU6-18P-201ENST00000384527 107 ntBASIC2.21□□□□□ -2.06
KRT9P35527 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
KRT9P35527 SNORA3.2-201ENST00000408221 125 ntBASIC2.21□□□□□ -2.06
KRT9P35527 AC244636.1-201ENST00000421152 228 ntBASIC2.21□□□□□ -2.06
KRT9P35527 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.21□□□□□ -2.06
KRT9P35527 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRT9P35527 AL357134.1-201ENST00000445848 426 ntBASIC2.21□□□□□ -2.06
KRT9P35527 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.21□□□□□ -2.06
KRT9P35527 RPL17P19-201ENST00000489069 552 ntBASIC2.21□□□□□ -2.06
KRT9P35527 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.21□□□□□ -2.06
KRT9P35527 RNVU1-2-201ENST00000516326 135 ntBASIC2.21□□□□□ -2.06
KRT9P35527 RNU6-1198P-201ENST00000516904 67 ntBASIC2.21□□□□□ -2.06
KRT9P35527 AL590705.4-201ENST00000532209 134 ntBASIC2.21□□□□□ -2.06
KRT9P35527 CBX3P8-201ENST00000532412 525 ntBASIC2.21□□□□□ -2.06
KRT9P35527 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.21□□□□□ -2.06
KRT9P35527 AC113195.1-201ENST00000579952 141 ntBASIC2.21□□□□□ -2.06
KRT9P35527 PRR13P7-201ENST00000605538 430 ntBASIC2.21□□□□□ -2.06
KRT9P35527 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.21□□□□□ -2.06
KRT9P35527 AL627230.6-201ENST00000611129 280 ntBASIC2.21□□□□□ -2.06
KRT9P35527 AC022513.1-201ENST00000624512 117 ntBASIC2.21□□□□□ -2.06
KRT9P35527 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.21□□□□□ -2.06
KRT9P35527 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.06
KRT9P35527 AL359851.1-201ENST00000569460 4997 ntBASIC2.2□□□□□ -2.06
KRT9P35527 Y_RNA.48-201ENST00000362710 103 ntBASIC2.2□□□□□ -2.06
KRT9P35527 Y_RNA.193-201ENST00000363979 102 ntBASIC2.2□□□□□ -2.06
KRT9P35527 RNU6-245P-201ENST00000384020 107 ntBASIC2.2□□□□□ -2.06
KRT9P35527 RNU6-418P-201ENST00000384035 107 ntBASIC2.2□□□□□ -2.06
KRT9P35527 SNORA67.3-201ENST00000384366 140 ntBASIC2.2□□□□□ -2.06
KRT9P35527 Y_RNA.485-201ENST00000384395 102 ntBASIC2.2□□□□□ -2.06
KRT9P35527 Y_RNA.574-201ENST00000384766 95 ntBASIC2.2□□□□□ -2.06
KRT9P35527 Y_RNA.645-201ENST00000391229 102 ntBASIC2.2□□□□□ -2.06
KRT9P35527 AL023284.1-201ENST00000403956 276 ntBASIC2.2□□□□□ -2.06
KRT9P35527 AL139156.1-201ENST00000412785 841 ntBASIC2.2□□□□□ -2.06
KRT9P35527 AL731563.1-201ENST00000442202 214 ntBASIC2.2□□□□□ -2.06
KRT9P35527 RPL23AP6-201ENST00000446637 472 ntBASIC2.2□□□□□ -2.06
KRT9P35527 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.2□□□□□ -2.06
KRT9P35527 RN7SKP210-201ENST00000459176 261 ntBASIC2.2□□□□□ -2.06
KRT9P35527 snoU13.26-201ENST00000459452 105 ntBASIC2.2□□□□□ -2.06
KRT9P35527 RNU7-175P-201ENST00000515915 61 ntBASIC2.2□□□□□ -2.06
KRT9P35527 RNU6-475P-201ENST00000516073 104 ntBASIC2.2□□□□□ -2.06
KRT9P35527 MIR4524B-201ENST00000581569 115 ntBASIC2.2□□□□□ -2.06
KRT9P35527 MIR3935-201ENST00000583472 104 ntBASIC2.2□□□□□ -2.06
KRT9P35527 AC008749.1-201ENST00000597650 306 ntBASIC2.2□□□□□ -2.06
KRT9P35527 AC124312.5-201ENST00000604451 268 ntBASIC2.2□□□□□ -2.06
KRT9P35527 AC090425.1-201ENST00000610007 140 ntBASIC2.2□□□□□ -2.06
KRT9P35527 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.2□□□□□ -2.06
KRT9P35527 AL606534.2-204ENST00000635008 178 ntBASIC2.2□□□□□ -2.06
KRT9P35527 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.2□□□□□ -2.06
KRT9P35527 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRT9P35527 AL159152.1-201ENST00000635019 2587 ntBASIC2.19□□□□□ -2.06
KRT9P35527 Y_RNA.188-201ENST00000363952 111 ntBASIC2.19□□□□□ -2.06
KRT9P35527 Y_RNA.380-201ENST00000365663 111 ntBASIC2.19□□□□□ -2.06
KRT9P35527 RNU6-505P-201ENST00000384427 107 ntBASIC2.19□□□□□ -2.06
KRT9P35527 SNORA64-201ENST00000384674 134 ntBASIC2.19□□□□□ -2.06
KRT9P35527 Y_RNA.556-201ENST00000384677 113 ntBASIC2.19□□□□□ -2.06
KRT9P35527 RNU6-541P-201ENST00000384709 110 ntBASIC2.19□□□□□ -2.06
KRT9P35527 Y_RNA.577-201ENST00000384794 101 ntBASIC2.19□□□□□ -2.06
KRT9P35527 RNU6-1156P-201ENST00000410365 100 ntBASIC2.19□□□□□ -2.06
KRT9P35527 AC114482.1-201ENST00000418010 247 ntBASIC2.19□□□□□ -2.06
KRT9P35527 MRPS18CP6-201ENST00000423587 223 ntBASIC2.19□□□□□ -2.06
KRT9P35527 MTCO3P29-201ENST00000432119 779 ntBASIC2.19□□□□□ -2.06
KRT9P35527 AL445305.1-201ENST00000432577 575 ntBASIC2.19□□□□□ -2.06
KRT9P35527 AC096638.1-201ENST00000444678 216 ntBASIC2.19□□□□□ -2.06
KRT9P35527 U8.20-201ENST00000459445 131 ntBASIC2.19□□□□□ -2.06
KRT9P35527 HMGN2P9-201ENST00000476875 229 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms