Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AP003733.2-201ENST00000529409 171 ntBASIC1.87□□□□□ -2.11
SHC1P29353 EIF4A1P12-201ENST00000551910 141 ntBASIC1.87□□□□□ -2.11
SHC1P29353 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.87□□□□□ -2.11
SHC1P29353 MIR4648-201ENST00000580107 72 ntBASIC1.87□□□□□ -2.11
SHC1P29353 AC006006.1-201ENST00000603082 144 ntBASIC1.87□□□□□ -2.11
SHC1P29353 MZT1P2-201ENST00000604387 248 ntBASIC1.87□□□□□ -2.11
SHC1P29353 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
SHC1P29353 AC130454.1-201ENST00000622948 401 ntBASIC1.87□□□□□ -2.11
SHC1P29353 BX322639.1-202ENST00000423987 2213 ntBASIC1.87□□□□□ -2.11
SHC1P29353 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SHC1P29353 snoU2_19.2-201ENST00000363024 80 ntBASIC1.86□□□□□ -2.11
SHC1P29353 RNU4-56P-201ENST00000364700 142 ntBASIC1.86□□□□□ -2.11
SHC1P29353 RNU6-702P-201ENST00000364982 107 ntBASIC1.86□□□□□ -2.11
SHC1P29353 Y_RNA.439-201ENST00000384119 94 ntBASIC1.86□□□□□ -2.11
SHC1P29353 RNU6-937P-201ENST00000384325 106 ntBASIC1.86□□□□□ -2.11
SHC1P29353 SNORD115-46-201ENST00000390982 71 ntBASIC1.86□□□□□ -2.11
SHC1P29353 SNORA46.1-201ENST00000391069 153 ntBASIC1.86□□□□□ -2.11
SHC1P29353 SNORD78.2-201ENST00000391076 69 ntBASIC1.86□□□□□ -2.11
SHC1P29353 MRPL35P1-201ENST00000404272 572 ntBASIC1.86□□□□□ -2.11
SHC1P29353 MIR1261-201ENST00000408659 82 ntBASIC1.86□□□□□ -2.11
SHC1P29353 RNU2-2P-201ENST00000410396 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 AC004866.1-201ENST00000411748 78 ntBASIC1.86□□□□□ -2.11
SHC1P29353 RPL26P26-201ENST00000480251 434 ntBASIC1.86□□□□□ -2.11
SHC1P29353 AC140059.1-201ENST00000489238 361 ntBASIC1.86□□□□□ -2.11
SHC1P29353 AC025465.3-201ENST00000510570 311 ntBASIC1.86□□□□□ -2.11
SHC1P29353 RNU6-570P-201ENST00000517051 105 ntBASIC1.86□□□□□ -2.11
SHC1P29353 IGKV3-31-201ENST00000523109 329 ntBASIC1.86□□□□□ -2.11
SHC1P29353 RRN3P3-201ENST00000549207 578 ntBASIC1.86□□□□□ -2.11
SHC1P29353 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.86□□□□□ -2.11
SHC1P29353 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.86□□□□□ -2.11
SHC1P29353 MIR4300-201ENST00000581016 96 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.15-201ENST00000611544 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.16-201ENST00000613119 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.12-201ENST00000613778 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.20-201ENST00000613956 192 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.9-201ENST00000615427 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.11-201ENST00000616345 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.2-201ENST00000616535 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.3-201ENST00000617785 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U4atac.1-201ENST00000618345 95 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.19-201ENST00000618602 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 RNU2-1-201ENST00000618664 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.6-201ENST00000619225 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.5-201ENST00000619465 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 U2.10-201ENST00000620268 191 ntBASIC1.86□□□□□ -2.11
SHC1P29353 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SHC1P29353 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SHC1P29353 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SHC1P29353 RNU6-280P-201ENST00000364145 104 ntBASIC1.85□□□□□ -2.11
SHC1P29353 Y_RNA.461-201ENST00000384263 103 ntBASIC1.85□□□□□ -2.11
SHC1P29353 AC027124.2-201ENST00000428249 105 ntBASIC1.85□□□□□ -2.11
SHC1P29353 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.85□□□□□ -2.11
SHC1P29353 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.85□□□□□ -2.11
SHC1P29353 RNU6-408P-201ENST00000515910 100 ntBASIC1.85□□□□□ -2.11
SHC1P29353 RNU6-1143P-201ENST00000516125 104 ntBASIC1.85□□□□□ -2.11
SHC1P29353 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
SHC1P29353 HSPE1P18-201ENST00000517602 280 ntBASIC1.85□□□□□ -2.11
SHC1P29353 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.85□□□□□ -2.11
SHC1P29353 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.85□□□□□ -2.11
SHC1P29353 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
SHC1P29353 Y_RNA.772-201ENST00000606692 102 ntBASIC1.85□□□□□ -2.11
SHC1P29353 AC010999.1-201ENST00000611856 324 ntBASIC1.85□□□□□ -2.11
SHC1P29353 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.85□□□□□ -2.11
SHC1P29353 MIR219B-201ENST00000637023 88 ntBASIC1.85□□□□□ -2.11
SHC1P29353 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.85□□□□□ -2.11
SHC1P29353 LINC02555-201ENST00000563933 1951 ntBASIC1.85□□□□□ -2.11
SHC1P29353 MTND5P35-201ENST00000557537 1720 ntBASIC1.84□□□□□ -2.11
SHC1P29353 Y_RNA.84-201ENST00000363011 104 ntBASIC1.84□□□□□ -2.11
SHC1P29353 U3.9-201ENST00000363823 204 ntBASIC1.84□□□□□ -2.11
SHC1P29353 Y_RNA.401-201ENST00000383965 117 ntBASIC1.84□□□□□ -2.11
SHC1P29353 ELOCP21-201ENST00000412558 336 ntBASIC1.84□□□□□ -2.11
SHC1P29353 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.84□□□□□ -2.11
SHC1P29353 CBX3P6-201ENST00000430257 527 ntBASIC1.84□□□□□ -2.11
SHC1P29353 AC091179.3-201ENST00000474761 144 ntBASIC1.84□□□□□ -2.11
SHC1P29353 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.84□□□□□ -2.11
SHC1P29353 MIR514B-201ENST00000516774 80 ntBASIC1.84□□□□□ -2.11
SHC1P29353 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.84□□□□□ -2.11
SHC1P29353 AC023157.2-201ENST00000540596 141 ntBASIC1.84□□□□□ -2.11
SHC1P29353 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.84□□□□□ -2.11
SHC1P29353 AC110588.1-201ENST00000559699 137 ntBASIC1.84□□□□□ -2.11
SHC1P29353 AC055872.1-201ENST00000570978 278 ntBASIC1.84□□□□□ -2.11
SHC1P29353 AL713866.2-201ENST00000603579 219 ntBASIC1.84□□□□□ -2.11
SHC1P29353 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.84□□□□□ -2.11
SHC1P29353 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.84□□□□□ -2.11
SHC1P29353 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
SHC1P29353 AC010615.1-201ENST00000594254 1764 ntBASIC1.83□□□□□ -2.12
SHC1P29353 RNU6-626P-201ENST00000363354 107 ntBASIC1.83□□□□□ -2.12
SHC1P29353 RNU6-727P-201ENST00000363592 107 ntBASIC1.83□□□□□ -2.12
SHC1P29353 Y_RNA.179-201ENST00000363844 90 ntBASIC1.83□□□□□ -2.12
SHC1P29353 RNU6-944P-201ENST00000364023 107 ntBASIC1.83□□□□□ -2.12
SHC1P29353 SNORD32B-201ENST00000364460 84 ntBASIC1.83□□□□□ -2.12
SHC1P29353 SNORA18.2-201ENST00000383865 132 ntBASIC1.83□□□□□ -2.12
SHC1P29353 RNU6-245P-201ENST00000384020 107 ntBASIC1.83□□□□□ -2.12
SHC1P29353 RNU6-20P-201ENST00000384106 107 ntBASIC1.83□□□□□ -2.12
SHC1P29353 RNU6-102P-201ENST00000384485 104 ntBASIC1.83□□□□□ -2.12
SHC1P29353 Y_RNA.556-201ENST00000384677 113 ntBASIC1.83□□□□□ -2.12
SHC1P29353 RNU6-713P-201ENST00000384761 107 ntBASIC1.83□□□□□ -2.12
SHC1P29353 MIR1302-6-201ENST00000408466 90 ntBASIC1.83□□□□□ -2.12
SHC1P29353 Y_RNA.595-201ENST00000410403 105 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms