Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC011195.1-201ENST00000578177 177 ntBASIC0.2□□□□□ -2.38
CCL1P22362 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.2□□□□□ -2.38
CCL1P22362 MIR103A2-201ENST00000362154 78 ntBASIC0.19□□□□□ -2.38
CCL1P22362 SNORD115-8-201ENST00000363856 82 ntBASIC0.19□□□□□ -2.38
CCL1P22362 RNU6-1317P-201ENST00000364582 104 ntBASIC0.19□□□□□ -2.38
CCL1P22362 SNORD115-38-201ENST00000365037 82 ntBASIC0.19□□□□□ -2.38
CCL1P22362 RNU6-342P-201ENST00000384521 104 ntBASIC0.19□□□□□ -2.38
CCL1P22362 SNORA40.3-201ENST00000390964 122 ntBASIC0.19□□□□□ -2.38
CCL1P22362 AL049545.1-201ENST00000401856 572 ntBASIC0.19□□□□□ -2.38
CCL1P22362 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.19□□□□□ -2.38
CCL1P22362 MRPS10P1-201ENST00000448483 130 ntBASIC0.19□□□□□ -2.38
CCL1P22362 snoU13.25-201ENST00000458945 104 ntBASIC0.19□□□□□ -2.38
CCL1P22362 AC002350.1-201ENST00000490759 375 ntBASIC0.19□□□□□ -2.38
CCL1P22362 SNORA14.1-201ENST00000516113 141 ntBASIC0.19□□□□□ -2.38
CCL1P22362 RNU6-58P-201ENST00000517143 103 ntBASIC0.19□□□□□ -2.38
CCL1P22362 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.19□□□□□ -2.38
CCL1P22362 RPL21P9-201ENST00000556149 474 ntBASIC0.19□□□□□ -2.38
CCL1P22362 FRG2DP-202ENST00000566967 323 ntBASIC0.19□□□□□ -2.38
CCL1P22362 AC023827.1-201ENST00000569247 97 ntBASIC0.19□□□□□ -2.38
CCL1P22362 MIR548AB-201ENST00000584917 84 ntBASIC0.19□□□□□ -2.38
CCL1P22362 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.19□□□□□ -2.38
CCL1P22362 AC122133.1-201ENST00000613964 233 ntBASIC0.19□□□□□ -2.38
CCL1P22362 AC068137.4-201ENST00000638485 296 ntBASIC0.19□□□□□ -2.38
CCL1P22362 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CCL1P22362 RNU4-28P-201ENST00000364739 141 ntBASIC0.18□□□□□ -2.38
CCL1P22362 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
CCL1P22362 RNU6-784P-201ENST00000384330 106 ntBASIC0.18□□□□□ -2.38
CCL1P22362 MIR499A-201ENST00000384903 122 ntBASIC0.18□□□□□ -2.38
CCL1P22362 MIR216A-201ENST00000385063 110 ntBASIC0.18□□□□□ -2.38
CCL1P22362 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.18□□□□□ -2.38
CCL1P22362 MIR936-201ENST00000401264 98 ntBASIC0.18□□□□□ -2.38
CCL1P22362 RNA5SP222-201ENST00000411039 105 ntBASIC0.18□□□□□ -2.38
CCL1P22362 RNA5SP247-201ENST00000411181 105 ntBASIC0.18□□□□□ -2.38
CCL1P22362 AL593851.1-201ENST00000426171 157 ntBASIC0.18□□□□□ -2.38
CCL1P22362 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.18□□□□□ -2.38
CCL1P22362 RNU6-341P-201ENST00000516973 96 ntBASIC0.18□□□□□ -2.38
CCL1P22362 AP002004.2-201ENST00000531656 154 ntBASIC0.18□□□□□ -2.38
CCL1P22362 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.18□□□□□ -2.38
CCL1P22362 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.18□□□□□ -2.38
CCL1P22362 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
CCL1P22362 MIR3192-201ENST00000584920 77 ntBASIC0.18□□□□□ -2.38
CCL1P22362 AL117336.2-201ENST00000602435 335 ntBASIC0.18□□□□□ -2.38
CCL1P22362 7SK.7-201ENST00000603504 247 ntBASIC0.18□□□□□ -2.38
CCL1P22362 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.18□□□□□ -2.38
CCL1P22362 FER-210ENST00000628534 558 ntTSL 5 BASIC0.18□□□□□ -2.38
CCL1P22362 AL390237.1-201ENST00000404226 1415 ntBASIC0.18□□□□□ -2.38
CCL1P22362 MIRLET7D-201ENST00000362263 87 ntBASIC0.17□□□□□ -2.38
CCL1P22362 RNU6-833P-201ENST00000363486 107 ntBASIC0.17□□□□□ -2.38
CCL1P22362 RNU6-1214P-201ENST00000363650 109 ntBASIC0.17□□□□□ -2.38
CCL1P22362 SNORA36.2-201ENST00000384004 127 ntBASIC0.17□□□□□ -2.38
CCL1P22362 SNORD111-201ENST00000408139 94 ntBASIC0.17□□□□□ -2.38
CCL1P22362 MTCO3P19-201ENST00000415864 321 ntBASIC0.17□□□□□ -2.38
CCL1P22362 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.17□□□□□ -2.38
CCL1P22362 MTND4P32-201ENST00000437189 1237 ntBASIC0.17□□□□□ -2.38
CCL1P22362 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.17□□□□□ -2.38
CCL1P22362 USP9YP29-201ENST00000445112 563 ntBASIC0.17□□□□□ -2.38
CCL1P22362 SNORD11.1-201ENST00000459482 85 ntBASIC0.17□□□□□ -2.38
CCL1P22362 AP000870.1-201ENST00000472927 406 ntBASIC0.17□□□□□ -2.38
CCL1P22362 MTND4P7-201ENST00000523876 130 ntBASIC0.17□□□□□ -2.38
CCL1P22362 AP001372.4-201ENST00000524889 472 ntBASIC0.17□□□□□ -2.38
CCL1P22362 AP003716.2-201ENST00000528260 108 ntBASIC0.17□□□□□ -2.38
CCL1P22362 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.17□□□□□ -2.38
CCL1P22362 MIR3124-201ENST00000582636 67 ntBASIC0.17□□□□□ -2.38
CCL1P22362 AC064836.2-201ENST00000609491 462 ntBASIC0.17□□□□□ -2.38
CCL1P22362 AC087683.2-201ENST00000611384 326 ntBASIC0.17□□□□□ -2.38
CCL1P22362 MIR8076-201ENST00000611401 83 ntBASIC0.17□□□□□ -2.38
CCL1P22362 AL589743.1-201ENST00000551932 2712 ntBASIC0.16□□□□□ -2.38
CCL1P22362 MTND5P16-201ENST00000460269 1703 ntBASIC0.16□□□□□ -2.38
CCL1P22362 RNU6-181P-201ENST00000363225 107 ntBASIC0.16□□□□□ -2.38
CCL1P22362 RNU5F-3P-201ENST00000363767 117 ntBASIC0.16□□□□□ -2.38
CCL1P22362 RNU6-348P-201ENST00000384386 107 ntBASIC0.16□□□□□ -2.38
CCL1P22362 MIR891A-201ENST00000401237 79 ntBASIC0.16□□□□□ -2.38
CCL1P22362 DAP3P1-201ENST00000441522 278 ntBASIC0.16□□□□□ -2.38
CCL1P22362 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.16□□□□□ -2.38
CCL1P22362 SNORD65B-201ENST00000459126 73 ntBASIC0.16□□□□□ -2.38
CCL1P22362 MTCO3P38-201ENST00000468910 766 ntBASIC0.16□□□□□ -2.38
CCL1P22362 RPL23AP75-201ENST00000491601 451 ntBASIC0.16□□□□□ -2.38
CCL1P22362 RNU6-445P-201ENST00000516949 107 ntBASIC0.16□□□□□ -2.38
CCL1P22362 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.16□□□□□ -2.38
CCL1P22362 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.16□□□□□ -2.38
CCL1P22362 AC016597.2-201ENST00000613256 341 ntBASIC0.16□□□□□ -2.38
CCL1P22362 MIRLET7C-201ENST00000362160 84 ntBASIC0.15□□□□□ -2.39
CCL1P22362 RNU6-1120P-201ENST00000362988 108 ntBASIC0.15□□□□□ -2.39
CCL1P22362 Y_RNA.100-201ENST00000363141 102 ntBASIC0.15□□□□□ -2.39
CCL1P22362 RNU6-137P-201ENST00000363680 108 ntBASIC0.15□□□□□ -2.39
CCL1P22362 Y_RNA.164-201ENST00000363709 102 ntBASIC0.15□□□□□ -2.39
CCL1P22362 Y_RNA.336-201ENST00000365307 109 ntBASIC0.15□□□□□ -2.39
CCL1P22362 RNU6-282P-201ENST00000365357 103 ntBASIC0.15□□□□□ -2.39
CCL1P22362 RNU6-1329P-201ENST00000365664 107 ntBASIC0.15□□□□□ -2.39
CCL1P22362 MIR140-201ENST00000385282 100 ntBASIC0.15□□□□□ -2.39
CCL1P22362 SNORD105-201ENST00000386910 85 ntBASIC0.15□□□□□ -2.39
CCL1P22362 RNA5SP219-201ENST00000390940 113 ntBASIC0.15□□□□□ -2.39
CCL1P22362 MRPS18CP6-201ENST00000423587 223 ntBASIC0.15□□□□□ -2.39
CCL1P22362 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.15□□□□□ -2.39
CCL1P22362 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.15□□□□□ -2.39
CCL1P22362 RNU7-180P-201ENST00000459240 63 ntBASIC0.15□□□□□ -2.39
CCL1P22362 SNORD42A-201ENST00000459584 64 ntBASIC0.15□□□□□ -2.39
CCL1P22362 AC010469.2-201ENST00000496412 480 ntBASIC0.15□□□□□ -2.39
CCL1P22362 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.15□□□□□ -2.39
CCL1P22362 AC010598.1-201ENST00000510378 103 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms